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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170332067
CESW01127491
153475
Gammaproteobacteria
ACG
Arg
>WENV170331075
CESW01024926
161596
Gammaproteobacteria
CAT
Met
>WENV170331490
CESW01064703
247088
Gammaproteobacteria
CCA
Trp
>WENV170331568
CESW01071528
247088
Gammaproteobacteria
CCA
Trp
>WENV170331927
CESW01109189
338234
Gammaproteobacteria
GAC
Val
>WENV170331890
CESW01105205
148148
Gammaproteobacteria
GAC
Val
>WENV170332418
CESW01149649
95653
Gammaproteobacteria
GAG
Leu
>WENV170332098
CESW01130887
6976
Gammaproteobacteria
GCT
Ser
>WENV170332675
CESW01256564
240084
Gammaproteobacteria
GGT
Thr
>WENV170332190
CESW01139500
237412
Gammaproteobacteria
TAC
Val
>WENV170332700
CESW01260358
96672
Gammaproteobacteria
TAG
Leu
>WENV170332602
CESW01236428
250885
Gammaproteobacteria
TGC
Ala
>WENV170332172
CESW01138146
241478
Gammaproteobacteria
TGT
Thr
>WENV170331732
CESW01087029
253713
Gammaproteobacteria
TTC
Glu
>WENV170332395
CESW01149310
341782
Gammaproteobacteria
TTG
Gln
>WENV170332438
CESW01157845
245602
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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