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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170336494
CETA01015124
147577
Alphaproteobacteria
CCG
Arg
>WENV170336541
CETA01018419
364533
Alphaproteobacteria
GCC
Gly
>WENV170336639
CETA01028141
369678
Alphaproteobacteria
GGT
Thr
>WENV170336799
CETA01040272
167926
Alphaproteobacteria
CAT
Met
>WENV170336804
CETA01040593
339725
Alphaproteobacteria
GAA
Phe
>WENV170337040
CETA01060827
29831
Alphaproteobacteria
TGA
Ser
>WENV170337062
CETA01063323
258175
Alphaproteobacteria
CGC
Ala
>WENV170337255
CETA01091359
412281
Alphaproteobacteria
CTG
Gln
>WENV170337404
CETA01109728
412917
Alphaproteobacteria
TCC
Gly
>WENV170337609
CETA01137490
191695
Alphaproteobacteria
CCT
Arg
>WENV170337753
CETA01153030
150356
Alphaproteobacteria
GTC
Asp
>WENV170337965
CETA01230510
10665
Alphaproteobacteria
GCT
Ser
>WENV170337969
CETA01232358
147289
Alphaproteobacteria
GTC
Asp
>WENV170337981
CETA01235610
339724
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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