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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170365022
CETN01005385
253766
Gammaproteobacteria
TTT
Lys
>WENV170365699
CETN01152679
145260
Gammaproteobacteria
CAT
Met
>WENV170365667
CETN01145481
46594
Gammaproteobacteria
GGA
Ser
>WENV170365566
CETN01107625
144979
Gammaproteobacteria
CGG
Pro
>WENV170365448
CETN01076144
373590
Gammaproteobacteria
TTG
Gln
>WENV170365673
CETN01147228
44873
Gammaproteobacteria
TGA
Ser
>WENV170365011
CETN01004272
237425
Gammaproteobacteria
TTC
Glu
>WENV170365049
CETN01007258
237425
Gammaproteobacteria
TTC
Glu
>WENV170365530
CETN01091928
95635
Gammaproteobacteria
CAA
Leu
>WENV170365300
CETN01052003
278046
Gammaproteobacteria
TGT
Thr
>WENV170365110
CETN01016668
279906
Gammaproteobacteria
TGC
Ala
>WENV170365046
CETN01007256
186449
Gammaproteobacteria
TGG
Pro
>WENV170365002
CETN01003907
184454
Gammaproteobacteria
ACG
Arg
>WENV170365680
CETN01148069
59658
Gammaproteobacteria
CAA
Leu
>WENV170365615
CETN01128148
149037
Gammaproteobacteria
GAC
Val
>WENV170365005
CETN01003935
411735
Gammaproteobacteria
GCA
Cys
>WENV170365635
CETN01134380
23396
Gammaproteobacteria
GGA
Ser
>WENV170365539
CETN01096759
59485
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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