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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170370439
CETR01102522
340011
Gammaproteobacteria
TTG
Gln
>WENV170370914
CETR01188567
236030
Gammaproteobacteria
CCA
Trp
>WENV170370524
CETR01113087
235341
Gammaproteobacteria
TGT
Thr
>WENV170371132
CETR01247547
149035
Gammaproteobacteria
CCG
Arg
>WENV170369629
CETR01021039
173648
Gammaproteobacteria
TCT
Arg
>WENV170371112
CETR01242871
144812
Gammaproteobacteria
GGG
Pro
>WENV170371252
CETR01267983
144812
Gammaproteobacteria
GGG
Pro
>WENV170370191
CETR01072996
160030
Gammaproteobacteria
GGG
Pro
>WENV170371254
CETR01268087
23369
Gammaproteobacteria
GCT
Ser
>WENV170370268
CETR01082117
236366
Gammaproteobacteria
GTG
His
>WENV170370353
CETR01091883
149036
Gammaproteobacteria
CCA
Trp
>WENV170370933
CETR01193932
161596
Gammaproteobacteria
CAT
Met
>WENV170370908
CETR01186033
38321
Gammaproteobacteria
TAA
Leu
>WENV170371043
CETR01229150
44873
Gammaproteobacteria
TGA
Ser
>WENV170369978
CETR01052091
412799
Gammaproteobacteria
GCA
Cys
>WENV170370964
CETR01205523
340801
Gammaproteobacteria
CCT
Arg
>WENV170369628
CETR01021039
149038
Gammaproteobacteria
TGG
Pro
>WENV170369390
CETR01002595
235344
Gammaproteobacteria
GGT
Thr
>WENV170369647
CETR01022649
240084
Gammaproteobacteria
GGT
Thr
>WENV170371133
CETR01248016
237211
Gammaproteobacteria
GGC
Ala
>WENV170371136
CETR01248138
411596
Gammaproteobacteria
GCA
Cys
>WENV170369426
CETR01005947
151889
Gammaproteobacteria
CAT
Met
>WENV170370848
CETR01164949
146807
Gammaproteobacteria
TCT
Arg
>WENV170369998
CETR01053416
257778
Gammaproteobacteria
TAC
Val
>WENV170371222
CETR01264106
179790
Gammaproteobacteria
CAT
Met
>WENV170370772
CETR01135861
45411
Gammaproteobacteria
GGA
Ser
>WENV170370735
CETR01134150
147117
Gammaproteobacteria
GTC
Asp
>WENV170371127
CETR01246549
276263
Gammaproteobacteria
TGC
Ala
>WENV170370647
CETR01127052
144813
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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