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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170381016
CETW01110245
147089
Alphaproteobacteria
ACG
Arg
>WENV170381163
CETW01128039
184120
Alphaproteobacteria
GTG
His
>WENV170380955
CETW01103326
176908
Alphaproteobacteria
GTC
Asp
>WENV170380238
CETW01017011
338282
Alphaproteobacteria
GTT
Asn
>WENV170381076
CETW01117011
27877
Alphaproteobacteria
GGA
Ser
>WENV170380274
CETW01021503
192195
Alphaproteobacteria
GTC
Asp
>WENV170381523
CETW01173683
167926
Alphaproteobacteria
CAT
Met
>WENV170380454
CETW01042546
161002
Alphaproteobacteria
GTG
His
>WENV170381948
CETW01302737
368915
Alphaproteobacteria
GGT
Thr
>WENV170380358
CETW01033218
412477
Alphaproteobacteria
GCA
Cys
>WENV170380224
CETW01015646
160158
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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