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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170383270
CETX01092326
312287
Gammaproteobacteria
TGT
Thr
>WENV170382878
CETX01052677
313881
Gammaproteobacteria
GGC
Ala
>WENV170382681
CETX01036883
279385
Gammaproteobacteria
TTT
Lys
>WENV170383407
CETX01105731
147779
Gammaproteobacteria
CAT
Met
>WENV170383764
CETX01142770
443007
Gammaproteobacteria
CCC
Gly
>WENV170383353
CETX01099832
101028
Gammaproteobacteria
GTA
Tyr
>WENV170383166
CETX01080674
145368
Gammaproteobacteria
CCT
Arg
>WENV170383330
CETX01097936
145368
Gammaproteobacteria
CCT
Arg
>WENV170382863
CETX01051378
283668
Gammaproteobacteria
TTT
Lys
>WENV170383377
CETX01102214
235452
Gammaproteobacteria
GAA
Phe
>WENV170383194
CETX01083231
149036
Gammaproteobacteria
CCA
Trp
>WENV170383279
CETX01093144
149036
Gammaproteobacteria
CCA
Trp
>WENV170383129
CETX01077279
146791
Gammaproteobacteria
GAC
Val
>WENV170383887
CETX01152611
238511
Gammaproteobacteria
TTT
Lys
>WENV170384425
CETX01300459
17329
Gammaproteobacteria
TGA
Ser
>WENV170382271
CETX01005246
237425
Gammaproteobacteria
TTC
Glu
>WENV170383693
CETX01136917
237425
Gammaproteobacteria
TTC
Glu
>WENV170384148
CETX01235933
52727
Gammaproteobacteria
GGA
Ser
>WENV170383904
CETX01157514
8480
Gammaproteobacteria
GCT
Ser
>WENV170382894
CETX01054518
252289
Gammaproteobacteria
TTT
Lys
>WENV170383784
CETX01144245
150587
Gammaproteobacteria
CAT
Met
>WENV170383072
CETX01071365
145237
Gammaproteobacteria
CAT
Met
>WENV170382187
CETX01000850
247974
Gammaproteobacteria
CCA
Trp
>WENV170382730
CETX01041230
243902
Gammaproteobacteria
GTT
Asn
>WENV170382731
CETX01041230
243902
Gammaproteobacteria
GTT
Asn
>WENV170384370
CETX01289400
269152
Gammaproteobacteria
GTG
His
>WENV170382302
CETX01007756
412476
Gammaproteobacteria
TCC
Gly
>WENV170382301
CETX01007756
113870
Gammaproteobacteria
GTA
Tyr
>WENV170382985
CETX01063294
173040
Gammaproteobacteria
GAC
Val
>WENV170382746
CETX01042913
145713
Gammaproteobacteria
CAT
Met
>WENV170382654
CETX01033735
410215
Gammaproteobacteria
TTG
Gln
>WENV170382711
CETX01039212
235886
Gammaproteobacteria
TTC
Glu
>WENV170382442
CETX01015993
195303
Gammaproteobacteria
GAT
Ile
>WENV170383052
CETX01069559
243485
Gammaproteobacteria
TGT
Thr
>WENV170382513
CETX01023096
243921
Gammaproteobacteria
TTT
Lys
>WENV170383152
CETX01079039
59658
Gammaproteobacteria
CAA
Leu
>WENV170383884
CETX01150390
45411
Gammaproteobacteria
GGA
Ser
>WENV170384178
CETX01244661
163580
Gammaproteobacteria
GAC
Val
>WENV170383047
CETX01069164
198797
Gammaproteobacteria
TGG
Pro
>WENV170384153
CETX01236539
59175
Gammaproteobacteria
CAG
Leu
>WENV170383494
CETX01117503
173617
Gammaproteobacteria
GTC
Asp
>WENV170384318
CETX01277439
147127
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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