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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170385077
CETY01037384
147879
Alphaproteobacteria
TGG
Pro
>WENV170385129
CETY01041813
236256
Alphaproteobacteria
TAC
Val
>WENV170385135
CETY01042734
109657
Alphaproteobacteria
TAG
Leu
>WENV170385168
CETY01045876
161002
Alphaproteobacteria
GTG
His
>WENV170385474
CETY01071097
176908
Alphaproteobacteria
GTC
Asp
>WENV170385482
CETY01071664
147877
Alphaproteobacteria
GTG
His
>WENV170385563
CETY01077425
249928
Alphaproteobacteria
TAC
Val
>WENV170385634
CETY01086525
306070
Alphaproteobacteria
CCA
Trp
>WENV170385891
CETY01113550
113700
Alphaproteobacteria
>WENV170386046
CETY01127404
412424
Alphaproteobacteria
TCC
Gly
>WENV170386342
CETY01159289
365250
Alphaproteobacteria
GCC
Gly
>WENV170386387
CETY01165936
163860
Alphaproteobacteria
GGG
Pro
>WENV170386414
CETY01168311
412424
Alphaproteobacteria
TCC
Gly
>WENV170386433
CETY01169746
165250
Alphaproteobacteria
TGG
Pro
>WENV170387403
CETY01420473
147334
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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