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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170398021
CEUD01116542
268154
Alphaproteobacteria
TGT
Thr
>WENV170398288
CEUD01147625
282595
Alphaproteobacteria
CCA
Trp
>WENV170397120
CEUD01027411
239119
Alphaproteobacteria
CGT
Thr
>WENV170399039
CEUD01335403
82652
Alphaproteobacteria
GTA
Tyr
>WENV170398015
CEUD01116118
151733
Alphaproteobacteria
GGG
Pro
>WENV170398657
CEUD01282275
339725
Alphaproteobacteria
GAA
Phe
>WENV170397412
CEUD01057263
258175
Alphaproteobacteria
CGC
Ala
>WENV170397015
CEUD01017242
167926
Alphaproteobacteria
CAT
Met
>WENV170397545
CEUD01070567
167926
Alphaproteobacteria
CAT
Met
>WENV170397743
CEUD01090134
364533
Alphaproteobacteria
GCC
Gly
>WENV170397402
CEUD01056430
242540
Alphaproteobacteria
TGC
Ala
>WENV170398298
CEUD01150051
96322
Alphaproteobacteria
CAA
Leu
>WENV170397554
CEUD01072126
174413
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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