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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170398389
CEUD01195360
166654
Gammaproteobacteria
GAC
Val
>WENV170397712
CEUD01085885
417812
Gammaproteobacteria
GCA
Cys
>WENV170397048
CEUD01020132
147779
Gammaproteobacteria
CAT
Met
>WENV170398318
CEUD01158435
145368
Gammaproteobacteria
CCT
Arg
>WENV170398432
CEUD01208997
58822
Gammaproteobacteria
CAA
Leu
>WENV170396896
CEUD01008001
160030
Gammaproteobacteria
GGG
Pro
>WENV170397418
CEUD01057831
160030
Gammaproteobacteria
GGG
Pro
>WENV170397800
CEUD01097599
145367
Gammaproteobacteria
GGG
Pro
>WENV170398767
CEUD01303707
145196
Gammaproteobacteria
CAT
Met
>WENV170396873
CEUD01006431
185163
Gammaproteobacteria
ACG
Arg
>WENV170397258
CEUD01041524
149036
Gammaproteobacteria
CCA
Trp
>WENV170397960
CEUD01111718
149036
Gammaproteobacteria
CCA
Trp
>WENV170398023
CEUD01116653
147778
Gammaproteobacteria
GGG
Pro
>WENV170399130
CEUD01340393
45345
Gammaproteobacteria
GGA
Ser
>WENV170399015
CEUD01333940
149073
Gammaproteobacteria
CAT
Met
>WENV170397586
CEUD01074483
412799
Gammaproteobacteria
GCA
Cys
>WENV170396957
CEUD01013703
340801
Gammaproteobacteria
CCT
Arg
>WENV170396920
CEUD01011062
95590
Gammaproteobacteria
>WENV170398699
CEUD01290658
339596
Gammaproteobacteria
CCT
Arg
>WENV170397108
CEUD01026036
278046
Gammaproteobacteria
TGT
Thr
>WENV170397136
CEUD01028715
278046
Gammaproteobacteria
TGT
Thr
>WENV170399002
CEUD01333007
150587
Gammaproteobacteria
CAT
Met
>WENV170397917
CEUD01107698
269152
Gammaproteobacteria
GTG
His
>WENV170397021
CEUD01017834
173040
Gammaproteobacteria
GAC
Val
>WENV170397695
CEUD01084175
235886
Gammaproteobacteria
TTC
Glu
>WENV170397577
CEUD01074053
425813
Gammaproteobacteria
GCA
Cys
>WENV170397942
CEUD01109381
425813
Gammaproteobacteria
GCA
Cys
>WENV170396907
CEUD01009373
186449
Gammaproteobacteria
TGG
Pro
>WENV170397560
CEUD01072348
243485
Gammaproteobacteria
TGT
Thr
>WENV170397714
CEUD01086255
243485
Gammaproteobacteria
TGT
Thr
>WENV170397689
CEUD01083742
59658
Gammaproteobacteria
CAA
Leu
>WENV170397215
CEUD01036488
257778
Gammaproteobacteria
TAC
Val
>WENV170397765
CEUD01093005
182592
Gammaproteobacteria
GAC
Val
>WENV170397584
CEUD01074423
149037
Gammaproteobacteria
GAC
Val
>WENV170399110
CEUD01339084
411735
Gammaproteobacteria
GCA
Cys
>WENV170397893
CEUD01106592
45411
Gammaproteobacteria
GGA
Ser
>WENV170399133
CEUD01340505
45411
Gammaproteobacteria
GGA
Ser
>WENV170397389
CEUD01055762
147776
Gammaproteobacteria
ACG
Arg
>WENV170397263
CEUD01041991
133560
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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