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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170399216
CEUE01000658
61925
Gammaproteobacteria
TAA
Leu
>WENV170399480
CEUE01018703
17426
Gammaproteobacteria
GCT
Ser
>WENV170399569
CEUE01026769
244202
Gammaproteobacteria
TTT
Lys
>WENV170399645
CEUE01031705
240642
Gammaproteobacteria
GTT
Asn
>WENV170399651
CEUE01033503
240642
Gammaproteobacteria
GTT
Asn
>WENV170399661
CEUE01034280
245602
Gammaproteobacteria
TTT
Lys
>WENV170399695
CEUE01036912
237421
Gammaproteobacteria
TGT
Thr
>WENV170399699
CEUE01036912
269248
Gammaproteobacteria
CCA
Trp
>WENV170399755
CEUE01042708
294663
Gammaproteobacteria
TTC
Glu
>WENV170399935
CEUE01058385
199268
Gammaproteobacteria
ACG
Arg
>WENV170400277
CEUE01090781
237421
Gammaproteobacteria
TGT
Thr
>WENV170400429
CEUE01107794
250885
Gammaproteobacteria
TGC
Ala
>WENV170400666
CEUE01136390
245602
Gammaproteobacteria
TTT
Lys
>WENV170400667
CEUE01136621
199268
Gammaproteobacteria
ACG
Arg
>WENV170400739
CEUE01143982
237421
Gammaproteobacteria
TGT
Thr
>WENV170400752
CEUE01145587
243485
Gammaproteobacteria
TGT
Thr
>WENV170400791
CEUE01149255
252289
Gammaproteobacteria
TTT
Lys
>WENV170400890
CEUE01159979
199268
Gammaproteobacteria
ACG
Arg
>WENV170400980
CEUE01169860
147647
Gammaproteobacteria
CAT
Met
>WENV170401182
CEUE01197449
16840
Gammaproteobacteria
GGA
Ser
>WENV170401191
CEUE01198098
269248
Gammaproteobacteria
CCA
Trp
>WENV170401197
CEUE01199291
312287
Gammaproteobacteria
TGT
Thr
>WENV170401266
CEUE01209379
411766
Gammaproteobacteria
GCA
Cys
>WENV170401268
CEUE01209480
312287
Gammaproteobacteria
TGT
Thr
>WENV170401269
CEUE01209527
241230
Gammaproteobacteria
GAA
Phe
>WENV170401653
CEUE01260605
198797
Gammaproteobacteria
TGG
Pro
>WENV170401656
CEUE01260871
148148
Gammaproteobacteria
GAC
Val
>WENV170401720
CEUE01267414
171935
Gammaproteobacteria
ACG
Arg
>WENV170401730
CEUE01268010
61925
Gammaproteobacteria
TAA
Leu
>WENV170401737
CEUE01268415
241212
Gammaproteobacteria
GTG
His
>WENV170401786
CEUE01273789
252289
Gammaproteobacteria
TTT
Lys
>WENV170401988
CEUE01290390
52727
Gammaproteobacteria
GGA
Ser
>WENV170402028
CEUE01292524
238370
Gammaproteobacteria
TTT
Lys
>WENV170402057
CEUE01295035
240642
Gammaproteobacteria
GTT
Asn
>WENV170402067
CEUE01295765
145713
Gammaproteobacteria
CAT
Met
>WENV170402142
CEUE01299415
190809
Gammaproteobacteria
GGG
Pro
>WENV170402508
CEUE01478798
149036
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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