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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170406199
CEUH01007746
412424
Alphaproteobacteria
TCC
Gly
>WENV170406378
CEUH01021759
339454
Alphaproteobacteria
>WENV170406386
CEUH01022305
167926
Alphaproteobacteria
CAT
Met
>WENV170406516
CEUH01032969
161002
Alphaproteobacteria
GTG
His
>WENV170406622
CEUH01041503
306070
Alphaproteobacteria
CCA
Trp
>WENV170406628
CEUH01041821
147089
Alphaproteobacteria
ACG
Arg
>WENV170406725
CEUH01051812
192195
Alphaproteobacteria
GTC
Asp
>WENV170406872
CEUH01067133
113700
Alphaproteobacteria
>WENV170407258
CEUH01119826
144964
Alphaproteobacteria
TGG
Pro
>WENV170407307
CEUH01125564
160158
Alphaproteobacteria
GAT
Ile
>WENV170407315
CEUH01126730
283763
Alphaproteobacteria
TGC
Ala
>WENV170407505
CEUH01141812
161002
Alphaproteobacteria
GTG
His
>WENV170407808
CEUH01227898
339722
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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