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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170424861
CEUP01018471
237493
Alphaproteobacteria
CCA
Trp
>WENV170425042
CEUP01035230
10665
Alphaproteobacteria
GCT
Ser
>WENV170424719
CEUP01005891
195945
Alphaproteobacteria
GAT
Ile
>WENV170424800
CEUP01012641
147879
Alphaproteobacteria
TGG
Pro
>WENV170424916
CEUP01022283
147876
Alphaproteobacteria
TCT
Arg
>WENV170425378
CEUP01090560
74116
Alphaproteobacteria
CAG
Leu
>WENV170425059
CEUP01038079
167926
Alphaproteobacteria
CAT
Met
>WENV170424780
CEUP01010270
237281
Alphaproteobacteria
CGT
Thr
>WENV170425028
CEUP01033555
23648
Alphaproteobacteria
CGA
Ser
>WENV170424886
CEUP01019728
319925
Alphaproteobacteria
TGT
Thr
>WENV170424827
CEUP01015909
339609
Alphaproteobacteria
GGT
Thr
>WENV170425282
CEUP01056936
29831
Alphaproteobacteria
TGA
Ser
>WENV170424896
CEUP01020425
412424
Alphaproteobacteria
TCC
Gly
>WENV170425339
CEUP01081970
377327
Alphaproteobacteria
GCC
Gly
>WENV170424907
CEUP01021120
236256
Alphaproteobacteria
TAC
Val
>WENV170424908
CEUP01021120
236256
Alphaproteobacteria
TAC
Val
>WENV170425272
CEUP01053347
294405
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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