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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170468658
CEVF01050838
154268
Gammaproteobacteria
ACG
Arg
>WENV170468509
CEVF01038811
59830
Gammaproteobacteria
CAA
Leu
>WENV170468355
CEVF01027370
58767
Gammaproteobacteria
CAG
Leu
>WENV170468356
CEVF01027370
58767
Gammaproteobacteria
CAG
Leu
>WENV170470610
CEVF01305544
147779
Gammaproteobacteria
CAT
Met
>WENV170468531
CEVF01040670
145713
Gammaproteobacteria
CAT
Met
>WENV170467974
CEVF01002291
149036
Gammaproteobacteria
CCA
Trp
>WENV170468280
CEVF01021754
149036
Gammaproteobacteria
CCA
Trp
>WENV170468801
CEVF01061043
149036
Gammaproteobacteria
CCA
Trp
>WENV170469474
CEVF01118224
149036
Gammaproteobacteria
CCA
Trp
>WENV170470371
CEVF01255246
149035
Gammaproteobacteria
CCG
Arg
>WENV170468282
CEVF01021959
235452
Gammaproteobacteria
GAA
Phe
>WENV170468496
CEVF01037527
148148
Gammaproteobacteria
GAC
Val
>WENV170468262
CEVF01020317
163882
Gammaproteobacteria
GAC
Val
>WENV170467999
CEVF01003584
149037
Gammaproteobacteria
GAC
Val
>WENV170468057
CEVF01007668
149037
Gammaproteobacteria
GAC
Val
>WENV170468302
CEVF01023519
98737
Gammaproteobacteria
GAG
Leu
>WENV170469174
CEVF01091617
417812
Gammaproteobacteria
GCA
Cys
>WENV170468562
CEVF01043179
412799
Gammaproteobacteria
GCA
Cys
>WENV170469380
CEVF01110637
412799
Gammaproteobacteria
GCA
Cys
>WENV170468879
CEVF01068369
412373
Gammaproteobacteria
GCA
Cys
>WENV170468716
CEVF01054370
411735
Gammaproteobacteria
GCA
Cys
>WENV170468424
CEVF01032706
17426
Gammaproteobacteria
GCT
Ser
>WENV170468287
CEVF01022044
240084
Gammaproteobacteria
GGT
Thr
>WENV170468831
CEVF01064974
235887
Gammaproteobacteria
GTG
His
>WENV170468364
CEVF01027479
59211
Gammaproteobacteria
TAA
Leu
>WENV170468487
CEVF01036923
257778
Gammaproteobacteria
TAC
Val
>WENV170468722
CEVF01054754
99112
Gammaproteobacteria
TAG
Leu
>WENV170469663
CEVF01132812
99112
Gammaproteobacteria
TAG
Leu
>WENV170470265
CEVF01220485
16284
Gammaproteobacteria
TGA
Ser
>WENV170468850
CEVF01065976
254914
Gammaproteobacteria
TGC
Ala
>WENV170469468
CEVF01118156
254914
Gammaproteobacteria
TGC
Ala
>WENV170470235
CEVF01201145
250885
Gammaproteobacteria
TGC
Ala
>WENV170470546
CEVF01295589
250885
Gammaproteobacteria
TGC
Ala
>WENV170468163
CEVF01014527
146435
Gammaproteobacteria
TGG
Pro
>WENV170469568
CEVF01125706
157977
Gammaproteobacteria
TGG
Pro
>WENV170469748
CEVF01139264
243485
Gammaproteobacteria
TGT
Thr
>WENV170469526
CEVF01121795
237421
Gammaproteobacteria
TGT
Thr
>WENV170469210
CEVF01094063
253713
Gammaproteobacteria
TTC
Glu
>WENV170469997
CEVF01152265
235886
Gammaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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