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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170490492
CEVQ01002139
235837
Gammaproteobacteria
GTT
Asn
>WENV170490957
CEVQ01028195
313881
Gammaproteobacteria
GGC
Ala
>WENV170493077
CEVQ01316012
144810
Gammaproteobacteria
TCG
Arg
>WENV170491100
CEVQ01036141
58767
Gammaproteobacteria
CAG
Leu
>WENV170493404
CEVQ01358629
149035
Gammaproteobacteria
CCG
Arg
>WENV170491182
CEVQ01041761
283668
Gammaproteobacteria
TTT
Lys
>WENV170491941
CEVQ01106686
283668
Gammaproteobacteria
TTT
Lys
>WENV170492564
CEVQ01140911
236013
Gammaproteobacteria
TGC
Ala
>WENV170492532
CEVQ01140654
160030
Gammaproteobacteria
GGG
Pro
>WENV170492125
CEVQ01121486
23369
Gammaproteobacteria
GCT
Ser
>WENV170490599
CEVQ01007492
185163
Gammaproteobacteria
ACG
Arg
>WENV170490765
CEVQ01017232
149036
Gammaproteobacteria
CCA
Trp
>WENV170492544
CEVQ01140769
149036
Gammaproteobacteria
CCA
Trp
>WENV170493069
CEVQ01313731
44873
Gammaproteobacteria
TGA
Ser
>WENV170492562
CEVQ01140910
412799
Gammaproteobacteria
GCA
Cys
>WENV170492332
CEVQ01133211
340801
Gammaproteobacteria
CCT
Arg
>WENV170492024
CEVQ01113330
426403
Gammaproteobacteria
GCA
Cys
>WENV170492320
CEVQ01132625
95750
Gammaproteobacteria
TAG
Leu
>WENV170491094
CEVQ01036041
199268
Gammaproteobacteria
ACG
Arg
>WENV170491095
CEVQ01036041
199268
Gammaproteobacteria
ACG
Arg
>WENV170491831
CEVQ01099533
149038
Gammaproteobacteria
TGG
Pro
>WENV170490593
CEVQ01007168
152301
Gammaproteobacteria
GAT
Ile
>WENV170491901
CEVQ01103455
269152
Gammaproteobacteria
GTG
His
>WENV170490451
CEVQ01000851
240084
Gammaproteobacteria
GGT
Thr
>WENV170491737
CEVQ01089969
58815
Gammaproteobacteria
CAA
Leu
>WENV170490598
CEVQ01007492
10767
Gammaproteobacteria
GCT
Ser
>WENV170492563
CEVQ01140910
77137
Gammaproteobacteria
TAA
Leu
>WENV170492479
CEVQ01139274
410215
Gammaproteobacteria
TTG
Gln
>WENV170490967
CEVQ01028787
151889
Gammaproteobacteria
CAT
Met
>WENV170491021
CEVQ01032889
195303
Gammaproteobacteria
GAT
Ile
>WENV170492303
CEVQ01132014
59658
Gammaproteobacteria
CAA
Leu
>WENV170493397
CEVQ01358488
149037
Gammaproteobacteria
GAC
Val
>WENV170492585
CEVQ01140951
45411
Gammaproteobacteria
GGA
Ser
>WENV170492057
CEVQ01116508
144813
Gammaproteobacteria
CCT
Arg
>WENV170492398
CEVQ01136207
173617
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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