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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170497734
CEVS01263498
236030
Gammaproteobacteria
CCA
Trp
>WENV170496077
CEVS01021649
145489
Gammaproteobacteria
GAT
Ile
>WENV170497192
CEVS01153104
244202
Gammaproteobacteria
TTT
Lys
>WENV170496023
CEVS01017344
241476
Gammaproteobacteria
TTT
Lys
>WENV170497381
CEVS01180084
247974
Gammaproteobacteria
CCA
Trp
>WENV170497609
CEVS01197176
238510
Gammaproteobacteria
GCC
Gly
>WENV170496078
CEVS01021649
236029
Gammaproteobacteria
TGC
Ala
>WENV170497101
CEVS01137235
411842
Gammaproteobacteria
GCA
Cys
>WENV170497014
CEVS01125136
250885
Gammaproteobacteria
TGC
Ala
>WENV170496640
CEVS01082171
236248
Gammaproteobacteria
TTT
Lys
>WENV170497905
CEVS01352972
243485
Gammaproteobacteria
TGT
Thr
>WENV170495947
CEVS01011056
237421
Gammaproteobacteria
TGT
Thr
>WENV170496832
CEVS01103568
247088
Gammaproteobacteria
CCA
Trp
>WENV170497360
CEVS01177675
247088
Gammaproteobacteria
CCA
Trp
>WENV170497681
CEVS01230125
16840
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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