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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170498961
CEVT01094817
28073
Alphaproteobacteria
GCT
Ser
>WENV170498911
CEVT01089271
113700
Alphaproteobacteria
>WENV170498222
CEVT01015896
200119
Alphaproteobacteria
CAT
Met
>WENV170498747
CEVT01067418
339454
Alphaproteobacteria
>WENV170498969
CEVT01096171
339490
Alphaproteobacteria
GAC
Val
>WENV170499310
CEVT01143535
235492
Alphaproteobacteria
GAA
Phe
>WENV170499343
CEVT01147891
96640
Alphaproteobacteria
CAA
Leu
>WENV170499565
CEVT01174533
339750
Alphaproteobacteria
GGT
Thr
>WENV170500141
CEVT01367506
341307
Alphaproteobacteria
GTT
Asn
>WENV170498460
CEVT01039017
340106
Alphaproteobacteria
GCC
Gly
>WENV170499931
CEVT01273114
426273
Alphaproteobacteria
GCA
Cys
>WENV170498595
CEVT01051738
412477
Alphaproteobacteria
GCA
Cys
>WENV170498786
CEVT01072311
160158
Alphaproteobacteria
GAT
Ile
>WENV170499225
CEVT01130808
266073
Alphaproteobacteria
TTT
Lys
>WENV170499428
CEVT01158325
144973
Alphaproteobacteria
CCT
Arg
>WENV170498833
CEVT01076864
150194
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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