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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170521347
CEWG01002793
113700
Alphaproteobacteria
>WENV170522380
CEWG01092336
113700
Alphaproteobacteria
>WENV170522637
CEWG01116540
113700
Alphaproteobacteria
>WENV170523160
CEWG01177114
113700
Alphaproteobacteria
>WENV170521721
CEWG01031106
109657
Alphaproteobacteria
TAG
Leu
>WENV170522432
CEWG01097507
109657
Alphaproteobacteria
TAG
Leu
>WENV170521528
CEWG01015401
176908
Alphaproteobacteria
GTC
Asp
>WENV170521563
CEWG01018513
338282
Alphaproteobacteria
GTT
Asn
>WENV170521651
CEWG01026440
202487
Alphaproteobacteria
CAT
Met
>WENV170523081
CEWG01164938
276379
Alphaproteobacteria
TGC
Ala
>WENV170521694
CEWG01028766
283763
Alphaproteobacteria
TGC
Ala
>WENV170522302
CEWG01084009
192195
Alphaproteobacteria
GTC
Asp
>WENV170521504
CEWG01012998
242540
Alphaproteobacteria
TGC
Ala
>WENV170521423
CEWG01007886
412424
Alphaproteobacteria
TCC
Gly
>WENV170521394
CEWG01005975
193837
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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