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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170527912
CEWJ01008002
185163
Gammaproteobacteria
ACG
Arg
>WENV170527924
CEWJ01009141
149037
Gammaproteobacteria
GAC
Val
>WENV170528058
CEWJ01017313
240642
Gammaproteobacteria
GTT
Asn
>WENV170528133
CEWJ01019844
319098
Gammaproteobacteria
TAC
Val
>WENV170528201
CEWJ01024611
149036
Gammaproteobacteria
CCA
Trp
>WENV170528212
CEWJ01025673
313881
Gammaproteobacteria
GGC
Ala
>WENV170528215
CEWJ01025852
313881
Gammaproteobacteria
GGC
Ala
>WENV170528273
CEWJ01031375
202944
Gammaproteobacteria
TGG
Pro
>WENV170528293
CEWJ01032872
149036
Gammaproteobacteria
CCA
Trp
>WENV170528298
CEWJ01033241
56673
Gammaproteobacteria
GGA
Ser
>WENV170528366
CEWJ01037399
149035
Gammaproteobacteria
CCG
Arg
>WENV170528443
CEWJ01044787
322642
Gammaproteobacteria
GGT
Thr
>WENV170528499
CEWJ01049162
313881
Gammaproteobacteria
GGC
Ala
>WENV170528518
CEWJ01050951
145713
Gammaproteobacteria
CAT
Met
>WENV170528570
CEWJ01055135
240619
Gammaproteobacteria
TGT
Thr
>WENV170528572
CEWJ01055135
412476
Gammaproteobacteria
TCC
Gly
>WENV170528573
CEWJ01055135
239187
Gammaproteobacteria
GGT
Thr
>WENV170528598
CEWJ01056869
198797
Gammaproteobacteria
TGG
Pro
>WENV170528722
CEWJ01067481
160030
Gammaproteobacteria
GGG
Pro
>WENV170528792
CEWJ01074233
243921
Gammaproteobacteria
TTT
Lys
>WENV170528840
CEWJ01079677
175964
Gammaproteobacteria
CAT
Met
>WENV170528893
CEWJ01084779
151889
Gammaproteobacteria
CAT
Met
>WENV170528992
CEWJ01093840
340801
Gammaproteobacteria
CCT
Arg
>WENV170529041
CEWJ01097142
59658
Gammaproteobacteria
CAA
Leu
>WENV170529087
CEWJ01101544
160030
Gammaproteobacteria
GGG
Pro
>WENV170529110
CEWJ01103224
149037
Gammaproteobacteria
GAC
Val
>WENV170529151
CEWJ01106953
149036
Gammaproteobacteria
CCA
Trp
>WENV170529190
CEWJ01111576
245602
Gammaproteobacteria
TTT
Lys
>WENV170529218
CEWJ01115363
17426
Gammaproteobacteria
GCT
Ser
>WENV170529232
CEWJ01116757
426403
Gammaproteobacteria
GCA
Cys
>WENV170529330
CEWJ01125281
173040
Gammaproteobacteria
GAC
Val
>WENV170529414
CEWJ01130876
411735
Gammaproteobacteria
GCA
Cys
>WENV170529432
CEWJ01132408
241136
Gammaproteobacteria
TTG
Gln
>WENV170529538
CEWJ01139298
149036
Gammaproteobacteria
CCA
Trp
>WENV170529709
CEWJ01143722
149036
Gammaproteobacteria
CCA
Trp
>WENV170529998
CEWJ01248191
45411
Gammaproteobacteria
GGA
Ser
>WENV170530088
CEWJ01269763
61925
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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