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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170535160
CEWP01030635
312287
Gammaproteobacteria
TGT
Thr
>WENV170536253
CEWP01165219
312287
Gammaproteobacteria
TGT
Thr
>WENV170535784
CEWP01105815
46594
Gammaproteobacteria
GGA
Ser
>WENV170536482
CEWP01188499
269248
Gammaproteobacteria
CCA
Trp
>WENV170534890
CEWP01004795
245602
Gammaproteobacteria
TTT
Lys
>WENV170536240
CEWP01164243
245602
Gammaproteobacteria
TTT
Lys
>WENV170535829
CEWP01110925
148148
Gammaproteobacteria
GAC
Val
>WENV170535979
CEWP01132923
301232
Gammaproteobacteria
TTC
Glu
>WENV170535618
CEWP01082350
202944
Gammaproteobacteria
TGG
Pro
>WENV170535933
CEWP01126276
419491
Gammaproteobacteria
CTG
Gln
>WENV170534968
CEWP01013124
199268
Gammaproteobacteria
ACG
Arg
>WENV170536852
CEWP01318136
292565
Gammaproteobacteria
TTC
Glu
>WENV170535147
CEWP01029450
311863
Gammaproteobacteria
GGC
Ala
>WENV170536506
CEWP01199210
152114
Gammaproteobacteria
CGG
Pro
>WENV170536767
CEWP01294614
179790
Gammaproteobacteria
CAT
Met
>WENV170535208
CEWP01034544
198797
Gammaproteobacteria
TGG
Pro
>WENV170535835
CEWP01112266
175414
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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