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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170540216
CWGX01000002
237792
Actinobacteria
CCT
Arg
>WENV170540218
CWGX01000005
413665
Actinobacteria
TTG
Gln
>WENV170540219
CWGX01000005
235173
Actinobacteria
GGC
Ala
>WENV170540220
CWGX01000007
144823
Actinobacteria
TCT
Arg
>WENV170540221
CWGX01000008
243162
Actinobacteria
GTT
Asn
>WENV170540225
CWGX01000011
16400
Actinobacteria
GAG
Leu
>WENV170540226
CWGX01000012
238476
Actinobacteria
CAC
Val
>WENV170540228
CWGX01000012
144826
Actinobacteria
GGG
Pro
>WENV170540229
CWGX01000016
158720
Actinobacteria
ACG
Arg
>WENV170540230
CWGX01000016
147146
Actinobacteria
ACG
Arg
>WENV170540231
CWGX01000018
145345
Actinobacteria
TAC
Val
>WENV170540233
CWGX01000023
113702
Actinobacteria
TAA
Leu
>WENV170540234
CWGX01000023
144595
Actinobacteria
CAA
Leu
>WENV170540235
CWGX01000025
411554
Actinobacteria
CCC
Gly
>WENV170540236
CWGX01000025
80622
Actinobacteria
CAG
Leu
>WENV170540241
CWGX01000035
238476
Actinobacteria
CAC
Val
>WENV170540239
CWGX01000035
113703
Actinobacteria
TAG
Leu
>WENV170540238
CWGX01000035
235121
Actinobacteria
CGT
Thr
>WENV170540244
CWGX01000038
44929
Actinobacteria
GGA
Ser
>WENV170540245
CWGX01000038
243671
Actinobacteria
CTC
Glu
>WENV170540246
CWGX01000038
338148
Actinobacteria
CTG
Gln
>WENV170540247
CWGX01000038
237794
Actinobacteria
CCG
Arg
>WENV170540249
CWGX01000039
235174
Actinobacteria
TGC
Ala
>WENV170540255
CWGX01000041
16219
Actinobacteria
GCT
Ser
>WENV170540251
CWGX01000041
235101
Actinobacteria
TTT
Lys
>WENV170540257
CWGX01000041
44855
Actinobacteria
TGA
Ser
>WENV170540256
CWGX01000041
45147
Actinobacteria
CGA
Ser
>WENV170540259
CWGX01000041
152215
Actinobacteria
CAT
Met
>WENV170540260
CWGX01000053
338239
Actinobacteria
TTC
Glu
>WENV170540261
CWGX01000053
147734
Actinobacteria
GTC
Asp
>WENV170540262
CWGX01000053
147734
Actinobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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