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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170572271
FLOH01000680
365250
Alphaproteobacteria
GCC
Gly
>WENV170571806
FLOH01000314
238733
Alphaproteobacteria
CCA
Trp
>WENV170571235
FLOH01000106
59361
Alphaproteobacteria
GAG
Leu
>WENV170572042
FLOH01000486
66752
Alphaproteobacteria
CAG
Leu
>WENV170573079
FLOH01005767
176908
Alphaproteobacteria
GTC
Asp
>WENV170572594
FLOH01001012
256971
Alphaproteobacteria
TGT
Thr
>WENV170570522
FLOH01000008
236134
Alphaproteobacteria
TAC
Val
>WENV170570725
FLOH01000019
236134
Alphaproteobacteria
TAC
Val
>WENV170572289
FLOH01000702
338289
Alphaproteobacteria
GAC
Val
>WENV170572945
FLOH01001557
243806
Alphaproteobacteria
CCA
Trp
>WENV170571647
FLOH01000244
348781
Alphaproteobacteria
GAA
Phe
>WENV170572143
FLOH01000559
412477
Alphaproteobacteria
GCA
Cys
>WENV170571648
FLOH01000244
338287
Alphaproteobacteria
GGT
Thr
>WENV170570523
FLOH01000008
150356
Alphaproteobacteria
GTC
Asp
>WENV170570726
FLOH01000019
150356
Alphaproteobacteria
GTC
Asp
>WENV170571232
FLOH01000104
150356
Alphaproteobacteria
GTC
Asp
>WENV170571368
FLOH01000140
150356
Alphaproteobacteria
GTC
Asp
>WENV170571923
FLOH01000382
150356
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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