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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170570913
FLOH01000037
412187
Bacteroidetes
>WENV170570364
FLOH01000001
169357
Bacteroidetes
CAT
Met
>WENV170571754
FLOH01000291
169357
Bacteroidetes
CAT
Met
>WENV170570378
FLOH01000002
159518
Bacteroidetes
GAT
Ile
>WENV170570387
FLOH01000002
159518
Bacteroidetes
GAT
Ile
>WENV170571669
FLOH01000254
45519
Bacteroidetes
GGA
Ser
>WENV170572760
FLOH01001272
181746
Bacteroidetes
GGC
Ala
>WENV170572255
FLOH01000662
127464
Bacteroidetes
TAC
Val
>WENV170570390
FLOH01000002
127153
Bacteroidetes
TAC
Val
>WENV170571724
FLOH01000279
102360
Bacteroidetes
TAG
Leu
>WENV170570915
FLOH01000037
95727
Bacteroidetes
TAG
Leu
>WENV170570463
FLOH01000005
127414
Bacteroidetes
TGG
Pro
>WENV170570466
FLOH01000005
127414
Bacteroidetes
TGG
Pro
>WENV170572046
FLOH01000495
354570
Bacteroidetes
TTC
Glu
>WENV170572317
FLOH01000739
241347
Bacteroidetes
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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