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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180011248
FLSK01000316
314498
Actinomycetota
GGC
Ala
>WENV180011887
FLSK01079825
314498
Actinomycetota
GGC
Ala
>WENV180012151
FLSK01217692
314498
Actinomycetota
GGC
Ala
>WENV180012163
FLSK01222384
246840
Actinomycetota
CAC
Val
>WENV180011896
FLSK01082757
145272
Actinomycetota
CAT
Met
>WENV180012236
FLSK01286509
338389
Actinomycetota
CAC
Val
>WENV180011770
FLSK01042121
145052
Actinomycetota
GAT
Ile
>WENV180011387
FLSK01002734
440908
Actinomycetota
GCA
Cys
>WENV180011389
FLSK01002734
440908
Actinomycetota
GCA
Cys
>WENV180011562
FLSK01004768
440908
Actinomycetota
GCA
Cys
>WENV180011517
FLSK01003400
239204
Actinomycetota
CTT
Lys
>WENV180012069
FLSK01159288
239204
Actinomycetota
CTT
Lys
>WENV180012278
FLSK01321969
239204
Actinomycetota
CTT
Lys
>WENV180012293
FLSK01335707
239204
Actinomycetota
CTT
Lys
>WENV180012370
FLSK01376791
239204
Actinomycetota
CTT
Lys
>WENV180011385
FLSK01002734
392594
Actinomycetota
GAC
Val
>WENV180011405
FLSK01003017
42714
Actinomycetota
GAG
Leu
>WENV180011953
FLSK01110692
45767
Actinomycetota
GGA
Ser
>WENV180012117
FLSK01192251
162402
Actinomycetota
GGG
Pro
>WENV180012334
FLSK01376378
162402
Actinomycetota
GGG
Pro
>WENV180011874
FLSK01075270
11157
Actinomycetota
GCT
Ser
>WENV180011216
FLSK01000009
293092
Actinomycetota
CTC
Glu
>WENV180011520
FLSK01003400
293092
Actinomycetota
CTC
Glu
>WENV180012015
FLSK01130733
293092
Actinomycetota
CTC
Glu
>WENV180011304
FLSK01001247
246365
Actinomycetota
ACG
Arg
>WENV180012118
FLSK01192999
246365
Actinomycetota
ACG
Arg
>WENV180011771
FLSK01042121
322982
Actinomycetota
TGC
Ala
>WENV180011616
FLSK01008944
240124
Actinomycetota
CGT
Thr
>WENV180011709
FLSK01026437
240124
Actinomycetota
CGT
Thr
>WENV180012110
FLSK01189542
240124
Actinomycetota
CGT
Thr
>WENV180012237
FLSK01287009
235768
Actinomycetota
CGT
Thr
>WENV180011388
FLSK01002734
388111
Actinomycetota
>WENV180011390
FLSK01002734
388111
Actinomycetota
>WENV180011563
FLSK01004768
388111
Actinomycetota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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