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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180025602
FTIP01107021
152292
Betaproteobacteria
TTG
Gln
>WENV180025691
FTIP01363161
152292
Betaproteobacteria
TTG
Gln
>WENV180025422
FTIP01003090
145694
Betaproteobacteria
ACG
Arg
>WENV180025423
FTIP01003090
145694
Betaproteobacteria
ACG
Arg
>WENV180025623
FTIP01161807
146768
Betaproteobacteria
CAT
Met
>WENV180025519
FTIP01030343
267868
Betaproteobacteria
GTG
His
>WENV180025474
FTIP01012295
146726
Betaproteobacteria
TCT
Arg
>WENV180025529
FTIP01037845
59085
Betaproteobacteria
TAG
Leu
>WENV180025607
FTIP01118528
59085
Betaproteobacteria
TAG
Leu
>WENV180025652
FTIP01250962
59085
Betaproteobacteria
TAG
Leu
>WENV180025359
FTIP01000254
154591
Betaproteobacteria
CAT
Met
>WENV180025388
FTIP01000964
154591
Betaproteobacteria
CAT
Met
>WENV180025390
FTIP01001045
154591
Betaproteobacteria
CAT
Met
>WENV180025397
FTIP01001381
154591
Betaproteobacteria
CAT
Met
>WENV180025398
FTIP01001381
154591
Betaproteobacteria
CAT
Met
>WENV180025457
FTIP01006697
154591
Betaproteobacteria
CAT
Met
>WENV180025491
FTIP01021188
154591
Betaproteobacteria
CAT
Met
>WENV180025492
FTIP01021355
154591
Betaproteobacteria
CAT
Met
>WENV180025538
FTIP01045542
154591
Betaproteobacteria
CAT
Met
>WENV180025547
FTIP01048776
154591
Betaproteobacteria
CAT
Met
>WENV180025584
FTIP01093892
154591
Betaproteobacteria
CAT
Met
>WENV180025587
FTIP01095226
154591
Betaproteobacteria
CAT
Met
>WENV180025625
FTIP01168516
154591
Betaproteobacteria
CAT
Met
>WENV180025405
FTIP01001853
153173
Betaproteobacteria
CAT
Met
>WENV180025413
FTIP01002250
153173
Betaproteobacteria
CAT
Met
>WENV180025426
FTIP01003572
153173
Betaproteobacteria
CAT
Met
>WENV180025432
FTIP01003968
153173
Betaproteobacteria
CAT
Met
>WENV180025447
FTIP01005367
153173
Betaproteobacteria
CAT
Met
>WENV180025498
FTIP01023050
153173
Betaproteobacteria
CAT
Met
>WENV180025516
FTIP01029254
153173
Betaproteobacteria
CAT
Met
>WENV180025544
FTIP01047324
153173
Betaproteobacteria
CAT
Met
>WENV180025562
FTIP01065034
153173
Betaproteobacteria
CAT
Met
>WENV180025597
FTIP01101293
153173
Betaproteobacteria
CAT
Met
>WENV180025418
FTIP01002532
352197
Betaproteobacteria
GGT
Thr
>WENV180025630
FTIP01191608
176286
Betaproteobacteria
CAT
Met
>WENV180025360
FTIP01000283
45127
Betaproteobacteria
CGA
Ser
>WENV180025456
FTIP01006606
45127
Betaproteobacteria
CGA
Ser
>WENV180025486
FTIP01017759
45127
Betaproteobacteria
CGA
Ser
>WENV180025527
FTIP01036633
45127
Betaproteobacteria
CGA
Ser
>WENV180025542
FTIP01046599
45127
Betaproteobacteria
CGA
Ser
>WENV180025557
FTIP01058346
45127
Betaproteobacteria
CGA
Ser
>WENV180025560
FTIP01062099
45127
Betaproteobacteria
CGA
Ser
>WENV180025601
FTIP01105562
45127
Betaproteobacteria
CGA
Ser
>WENV180025679
FTIP01321146
45127
Betaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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