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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170692215
LGOV01000927
148143
Firmicutes
TGG
Pro
>WENV170692216
LGOV01000927
148104
Firmicutes
CAT
Met
>WENV170692218
LGOV01000927
148143
Firmicutes
TGG
Pro
>WENV170692235
LGOV01001494
238855
Firmicutes
TTT
Lys
>WENV170692237
LGOV01001494
96158
Firmicutes
TAG
Leu
>WENV170692263
LGOV01001797
348433
Firmicutes
TTC
Glu
>WENV170692265
LGOV01001797
37307
Firmicutes
TGA
Ser
>WENV170692287
LGOV01002185
148104
Firmicutes
CAT
Met
>WENV170692426
LGOV01007216
261586
Firmicutes
TAC
Val
>WENV170692440
LGOV01007583
148137
Firmicutes
CAT
Met
>WENV170692441
LGOV01007583
359525
Firmicutes
>WENV170692555
LGOV01013446
238855
Firmicutes
TTT
Lys
>WENV170692575
LGOV01015078
261586
Firmicutes
TAC
Val
>WENV170692608
LGOV01016271
148140
Firmicutes
GTC
Asp
>WENV170692611
LGOV01016272
359540
Firmicutes
GTT
Asn
>WENV170692612
LGOV01016272
37278
Firmicutes
TAA
Leu
>WENV170692629
LGOV01017532
268023
Firmicutes
TTT
Lys
>WENV170692630
LGOV01017532
339328
Firmicutes
GCA
Cys
>WENV170692652
LGOV01019615
154711
Firmicutes
TGG
Pro
>WENV170692717
LGOV01024455
412448
Firmicutes
TCC
Gly
>WENV170692720
LGOV01024455
268023
Firmicutes
TTT
Lys
>WENV170692725
LGOV01024455
173314
Firmicutes
GAT
Ile
>WENV170692955
LGOV01053247
237285
Firmicutes
TGT
Thr
>WENV170692994
LGOV01058449
37307
Firmicutes
TGA
Ser
>WENV170692996
LGOV01058449
359525
Firmicutes
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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