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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170695224
LGVE01061607
250271
Deltaproteobacteria
TGC
Ala
>WENV170695791
LGVE01171404
247575
Deltaproteobacteria
TGC
Ala
>WENV170695789
LGVE01171198
184695
Deltaproteobacteria
CGG
Pro
>WENV170695458
LGVE01097621
167749
Deltaproteobacteria
CCA
Trp
>WENV170695956
LGVE01191869
167749
Deltaproteobacteria
CCA
Trp
>WENV170695314
LGVE01074757
174262
Deltaproteobacteria
GTC
Asp
>WENV170695688
LGVE01153724
174262
Deltaproteobacteria
GTC
Asp
>WENV170695826
LGVE01177339
174262
Deltaproteobacteria
GTC
Asp
>WENV170695970
LGVE01193033
174262
Deltaproteobacteria
GTC
Asp
>WENV170695377
LGVE01085084
152132
Deltaproteobacteria
CAT
Met
>WENV170696073
LGVE01210685
152132
Deltaproteobacteria
CAT
Met
>WENV170695086
LGVE01043998
413572
Deltaproteobacteria
GCA
Cys
>WENV170695896
LGVE01185011
413572
Deltaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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