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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170695875
LGVE01183873
188598
Firmicutes
CAT
Met
>WENV170695488
LGVE01106481
359540
Firmicutes
GTT
Asn
>WENV170695909
LGVE01185778
359525
Firmicutes
>WENV170695739
LGVE01164961
37279
Firmicutes
TGA
Ser
>WENV170695452
LGVE01097275
148104
Firmicutes
CAT
Met
>WENV170695846
LGVE01182500
362119
Firmicutes
GCC
Gly
>WENV170695907
LGVE01185773
362119
Firmicutes
GCC
Gly
>WENV170695489
LGVE01106481
37278
Firmicutes
TAA
Leu
>WENV170695493
LGVE01106481
300148
Firmicutes
TAC
Val
>WENV170695960
LGVE01192101
37307
Firmicutes
TGA
Ser
>WENV170695411
LGVE01087681
339328
Firmicutes
GCA
Cys
>WENV170695651
LGVE01143711
148143
Firmicutes
TGG
Pro
>WENV170695974
LGVE01193373
148140
Firmicutes
GTC
Asp
>WENV170695561
LGVE01121867
199936
Firmicutes
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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