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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170698155
LGVF01274341
162266
Bacteroidetes
CAT
Met
>WENV170697990
LGVF01234996
159518
Bacteroidetes
GAT
Ile
>WENV170697110
LGVF01082322
267954
Bacteroidetes
GCC
Gly
>WENV170698600
LGVF01371501
267954
Bacteroidetes
GCC
Gly
>WENV170698145
LGVF01271653
187493
Bacteroidetes
GGC
Ala
>WENV170696965
LGVF01068622
190649
Bacteroidetes
GTT
Asn
>WENV170699721
LGVF01636287
102360
Bacteroidetes
TAG
Leu
>WENV170696988
LGVF01070276
96124
Bacteroidetes
TAG
Leu
>WENV170697879
LGVF01214071
301737
Bacteroidetes
TCC
Gly
>WENV170697881
LGVF01214071
301737
Bacteroidetes
TCC
Gly
>WENV170697883
LGVF01214071
301737
Bacteroidetes
TCC
Gly
>WENV170698445
LGVF01337685
301737
Bacteroidetes
TCC
Gly
>WENV170698960
LGVF01448521
163866
Bacteroidetes
TCG
Arg
>WENV170698081
LGVF01254100
191087
Bacteroidetes
TCT
Arg
>WENV170696699
LGVF01043292
180185
Bacteroidetes
TGC
Ala
>WENV170697827
LGVF01203657
180185
Bacteroidetes
TGC
Ala
>WENV170697336
LGVF01117386
179315
Bacteroidetes
TGC
Ala
>WENV170697569
LGVF01155593
127414
Bacteroidetes
TGG
Pro
>WENV170699030
LGVF01463197
127414
Bacteroidetes
TGG
Pro
>WENV170696781
LGVF01049237
343033
Bacteroidetes
TTC
Glu
>WENV170696873
LGVF01056749
236699
Bacteroidetes
TTG
Gln
>WENV170698350
LGVF01318931
236699
Bacteroidetes
TTG
Gln
>WENV170698524
LGVF01353973
236699
Bacteroidetes
TTG
Gln
>WENV170698643
LGVF01380541
236699
Bacteroidetes
TTG
Gln
>WENV170699364
LGVF01536851
236699
Bacteroidetes
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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