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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170699567
LGVF01587013
161078
Deltaproteobacteria
ACG
Arg
>WENV170696801
LGVF01050564
250271
Deltaproteobacteria
TGC
Ala
>WENV170698142
LGVF01269470
247575
Deltaproteobacteria
TGC
Ala
>WENV170699561
LGVF01586104
64858
Deltaproteobacteria
CAG
Leu
>WENV170697232
LGVF01097755
184695
Deltaproteobacteria
CGG
Pro
>WENV170699288
LGVF01521096
184695
Deltaproteobacteria
CGG
Pro
>WENV170699400
LGVF01544743
162516
Deltaproteobacteria
GTC
Asp
>WENV170696451
LGVF01017749
167749
Deltaproteobacteria
CCA
Trp
>WENV170698508
LGVF01350532
167749
Deltaproteobacteria
CCA
Trp
>WENV170699565
LGVF01586544
167749
Deltaproteobacteria
CCA
Trp
>WENV170697520
LGVF01150730
174262
Deltaproteobacteria
GTC
Asp
>WENV170698648
LGVF01381208
174262
Deltaproteobacteria
GTC
Asp
>WENV170698946
LGVF01445576
174262
Deltaproteobacteria
GTC
Asp
>WENV170699189
LGVF01497337
174262
Deltaproteobacteria
GTC
Asp
>WENV170699197
LGVF01500023
174262
Deltaproteobacteria
GTC
Asp
>WENV170699249
LGVF01514163
174262
Deltaproteobacteria
GTC
Asp
>WENV170696492
LGVF01021788
152132
Deltaproteobacteria
CAT
Met
>WENV170697724
LGVF01181948
152132
Deltaproteobacteria
CAT
Met
>WENV170698539
LGVF01357131
152132
Deltaproteobacteria
CAT
Met
>WENV170699035
LGVF01464041
152132
Deltaproteobacteria
CAT
Met
>WENV170699399
LGVF01544743
253201
Deltaproteobacteria
TAC
Val
>WENV170699746
LGVF01644958
253201
Deltaproteobacteria
TAC
Val
>WENV170698981
LGVF01453028
45804
Deltaproteobacteria
CGA
Ser
>WENV170696419
LGVF01016506
342802
Deltaproteobacteria
GAC
Val
>WENV170699593
LGVF01592911
161079
Deltaproteobacteria
CCA
Trp
>WENV170698341
LGVF01317030
132099
Deltaproteobacteria
GAT
Ile
>WENV170696607
LGVF01032759
315876
Deltaproteobacteria
TGC
Ala
>WENV170696865
LGVF01055876
315876
Deltaproteobacteria
TGC
Ala
>WENV170697416
LGVF01131722
315876
Deltaproteobacteria
TGC
Ala
>WENV170698342
LGVF01317030
315876
Deltaproteobacteria
TGC
Ala
>WENV170698375
LGVF01323742
315876
Deltaproteobacteria
TGC
Ala
>WENV170699015
LGVF01461439
315876
Deltaproteobacteria
TGC
Ala
>WENV170699157
LGVF01490989
315876
Deltaproteobacteria
TGC
Ala
>WENV170696742
LGVF01047440
413572
Deltaproteobacteria
GCA
Cys
>WENV170697671
LGVF01171248
413572
Deltaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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