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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180040576
LLBZ010001160
113694
Bacteroidetes
GTA
Tyr
>WENV180040616
LLBZ010002504
148047
Bacteroidetes
CAT
Met
>WENV180040617
LLBZ010002535
347983
Bacteroidetes
TTC
Glu
>WENV180040762
LLBZ010012831
127458
Bacteroidetes
GAC
Val
>WENV180040976
LLBZ010031061
302196
Bacteroidetes
TTT
Lys
>WENV180040977
LLBZ010031061
302196
Bacteroidetes
TTT
Lys
>WENV180041037
LLBZ010036462
37199
Bacteroidetes
TAA
Leu
>WENV180041062
LLBZ010039476
239858
Bacteroidetes
TTT
Lys
>WENV180041063
LLBZ010039476
239858
Bacteroidetes
TTT
Lys
>WENV180041091
LLBZ010043201
415980
Bacteroidetes
TTG
Gln
>WENV180041132
LLBZ010049799
113694
Bacteroidetes
GTA
Tyr
>WENV180041133
LLBZ010049799
412189
Bacteroidetes
CCA
Trp
>WENV180041152
LLBZ010053577
237606
Bacteroidetes
GCC
Gly
>WENV180041467
LLBZ010145486
412189
Bacteroidetes
CCA
Trp
>WENV180041724
LLBZ010347005
413186
Bacteroidetes
>WENV180041726
LLBZ010348143
200537
Bacteroidetes
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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