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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180042682
LQAG01000069
174262
Deltaproteobacteria
GTC
Asp
>WENV180042683
LQAG01000074
342802
Deltaproteobacteria
GAC
Val
>WENV180042766
LQAG01000511
152132
Deltaproteobacteria
CAT
Met
>WENV180042787
LQAG01000700
315876
Deltaproteobacteria
TGC
Ala
>WENV180042815
LQAG01001614
269764
Deltaproteobacteria
GGC
Ala
>WENV180042836
LQAG01003628
256453
Deltaproteobacteria
TGC
Ala
>WENV180042838
LQAG01003846
174404
Deltaproteobacteria
CCA
Trp
>WENV180042856
LQAG01006902
256456
Deltaproteobacteria
CAT
Met
>WENV180042865
LQAG01008609
154121
Deltaproteobacteria
GTC
Asp
>WENV180042875
LQAG01010105
165016
Deltaproteobacteria
CGG
Pro
>WENV180042909
LQAG01012872
256452
Deltaproteobacteria
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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