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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170747934
LUMD01001705
235887
Gammaproteobacteria
GTG
His
>WENV170748060
LUMD01003475
313881
Gammaproteobacteria
GGC
Ala
>WENV170747919
LUMD01001609
277725
Gammaproteobacteria
TAC
Val
>WENV170747799
LUMD01000710
149035
Gammaproteobacteria
CCG
Arg
>WENV170748156
LUMD01005887
145368
Gammaproteobacteria
CCT
Arg
>WENV170748382
LUMD01019160
283668
Gammaproteobacteria
TTT
Lys
>WENV170747976
LUMD01002276
58822
Gammaproteobacteria
CAA
Leu
>WENV170747915
LUMD01001593
147053
Gammaproteobacteria
GTT
Asn
>WENV170747851
LUMD01001040
145260
Gammaproteobacteria
CAT
Met
>WENV170748069
LUMD01003698
145260
Gammaproteobacteria
CAT
Met
>WENV170748042
LUMD01003064
145367
Gammaproteobacteria
GGG
Pro
>WENV170747840
LUMD01000953
185163
Gammaproteobacteria
ACG
Arg
>WENV170748269
LUMD01009862
198730
Gammaproteobacteria
GAC
Val
>WENV170747734
LUMD01000221
149036
Gammaproteobacteria
CCA
Trp
>WENV170747798
LUMD01000709
149036
Gammaproteobacteria
CCA
Trp
>WENV170747852
LUMD01001042
145261
Gammaproteobacteria
CAT
Met
>WENV170748395
LUMD01020196
16284
Gammaproteobacteria
TGA
Ser
>WENV170747883
LUMD01001325
145369
Gammaproteobacteria
CGG
Pro
>WENV170747786
LUMD01000594
98737
Gammaproteobacteria
GAG
Leu
>WENV170748123
LUMD01004968
412799
Gammaproteobacteria
GCA
Cys
>WENV170747966
LUMD01002070
340801
Gammaproteobacteria
CCT
Arg
>WENV170747944
LUMD01001797
95750
Gammaproteobacteria
TAG
Leu
>WENV170747857
LUMD01001097
97031
Gammaproteobacteria
TAG
Leu
>WENV170748067
LUMD01003698
97031
Gammaproteobacteria
TAG
Leu
>WENV170748070
LUMD01003698
97031
Gammaproteobacteria
TAG
Leu
>WENV170747858
LUMD01001097
149038
Gammaproteobacteria
TGG
Pro
>WENV170747913
LUMD01001580
149038
Gammaproteobacteria
TGG
Pro
>WENV170747922
LUMD01001650
309581
Gammaproteobacteria
GAA
Phe
>WENV170747815
LUMD01000824
145237
Gammaproteobacteria
CAT
Met
>WENV170748207
LUMD01007601
247974
Gammaproteobacteria
CCA
Trp
>WENV170748243
LUMD01008746
59830
Gammaproteobacteria
CAA
Leu
>WENV170748013
LUMD01002747
240084
Gammaproteobacteria
GGT
Thr
>WENV170747839
LUMD01000953
10767
Gammaproteobacteria
GCT
Ser
>WENV170748124
LUMD01004968
77137
Gammaproteobacteria
TAA
Leu
>WENV170748005
LUMD01002699
411842
Gammaproteobacteria
GCA
Cys
>WENV170747809
LUMD01000783
235886
Gammaproteobacteria
TTC
Glu
>WENV170747885
LUMD01001332
128930
Gammaproteobacteria
GTC
Asp
>WENV170748434
LUMD01023593
243921
Gammaproteobacteria
TTT
Lys
>WENV170747951
LUMD01001863
149037
Gammaproteobacteria
GAC
Val
>WENV170748035
LUMD01002951
411735
Gammaproteobacteria
GCA
Cys
>WENV170747932
LUMD01001705
198797
Gammaproteobacteria
TGG
Pro
>WENV170748441
LUMD01024070
20500
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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