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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170749458
LUMF01000076
128930
Gammaproteobacteria
GTC
Asp
>WENV170749585
LUMF01001876
278046
Gammaproteobacteria
TGT
Thr
>WENV170749649
LUMF01003454
340801
Gammaproteobacteria
CCT
Arg
>WENV170749724
LUMF01006103
185163
Gammaproteobacteria
ACG
Arg
>WENV170749723
LUMF01006103
10767
Gammaproteobacteria
GCT
Ser
>WENV170749725
LUMF01006152
149036
Gammaproteobacteria
CCA
Trp
>WENV170749850
LUMF01014537
411842
Gammaproteobacteria
GCA
Cys
>WENV170749906
LUMF01018549
278046
Gammaproteobacteria
TGT
Thr
>WENV170749916
LUMF01019205
185151
Gammaproteobacteria
TCT
Arg
>WENV170749913
LUMF01019205
145260
Gammaproteobacteria
CAT
Met
>WENV170749914
LUMF01019205
97031
Gammaproteobacteria
TAG
Leu
>WENV170749915
LUMF01019205
149038
Gammaproteobacteria
TGG
Pro
>WENV170749970
LUMF01027224
160030
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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