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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170787713
MDSV01022266
341034
Cyanobacteria
GGT
Thr
>WENV170788079
MDSV01027305
237009
Cyanobacteria
GGC
Ala
>WENV170788256
MDSV01030574
349164
Cyanobacteria
TGT
Thr
>WENV170788821
MDSV01040110
267489
Cyanobacteria
GGC
Ala
>WENV170788927
MDSV01041713
373624
Cyanobacteria
TTG
Gln
>WENV170789145
MDSV01045569
162341
Cyanobacteria
TCT
Arg
>WENV170789175
MDSV01046015
153717
Cyanobacteria
CAT
Met
>WENV170789228
MDSV01046860
145893
Cyanobacteria
CAT
Met
>WENV170789265
MDSV01047479
267489
Cyanobacteria
GGC
Ala
>WENV170789877
MDSV01056905
267489
Cyanobacteria
GGC
Ala
>WENV170790157
MDSV01061608
366531
Cyanobacteria
TTG
Gln
>WENV170790159
MDSV01061622
240100
Cyanobacteria
CAT
Met
>WENV170790590
MDSV01068667
267489
Cyanobacteria
GGC
Ala
>WENV170791935
MDSV01091278
164907
Cyanobacteria
GGG
Pro
>WENV170792154
MDSV01095139
149253
Cyanobacteria
ACG
Arg
>WENV170792337
MDSV01097968
373624
Cyanobacteria
TTG
Gln
>WENV170792401
MDSV01099033
267489
Cyanobacteria
GGC
Ala
>WENV170792680
MDSV01103501
387387
Cyanobacteria
GAC
Val
>WENV170792761
MDSV01104499
149253
Cyanobacteria
ACG
Arg
>WENV170792887
MDSV01106881
145893
Cyanobacteria
CAT
Met
>WENV170793545
MDSV01118097
373624
Cyanobacteria
TTG
Gln
>WENV170793682
MDSV01120360
341034
Cyanobacteria
GGT
Thr
>WENV170794942
MDSV01140004
267489
Cyanobacteria
GGC
Ala
>WENV170795196
MDSV01144338
153717
Cyanobacteria
CAT
Met
>WENV170795564
MDSV01150774
23971
Cyanobacteria
TGA
Ser
>WENV170795606
MDSV01151634
267489
Cyanobacteria
GGC
Ala
>WENV170795883
MDSV01155504
109616
Cyanobacteria
GTA
Tyr
>WENV170796167
MDSV01160026
267489
Cyanobacteria
GGC
Ala
>WENV170796760
MDSV01169333
344607
Cyanobacteria
CCC
Gly
>WENV170796802
MDSV01169727
95762
Cyanobacteria
AAG
Leu
>WENV170796832
MDSV01170410
153717
Cyanobacteria
CAT
Met
>WENV170796952
MDSV01172218
162341
Cyanobacteria
TCT
Arg
>WENV170797005
MDSV01173325
145893
Cyanobacteria
CAT
Met
>WENV170797454
MDSV01180567
164907
Cyanobacteria
GGG
Pro
>WENV170797504
MDSV01181363
245150
Cyanobacteria
GTG
His
>WENV170797692
MDSV01184512
162341
Cyanobacteria
TCT
Arg
>WENV170798777
MDSV01202068
245150
Cyanobacteria
GTG
His
>WENV170798788
MDSV01202293
267489
Cyanobacteria
GGC
Ala
>WENV170798828
MDSV01203183
173121
Cyanobacteria
GTC
Asp
>WENV170799531
MDSV01215116
153717
Cyanobacteria
CAT
Met
>WENV170799576
MDSV01215734
267489
Cyanobacteria
GGC
Ala
>WENV170800271
MDSV01227303
373624
Cyanobacteria
TTG
Gln
>WENV170800503
MDSV01231221
267489
Cyanobacteria
GGC
Ala
>WENV170800843
MDSV01237108
162341
Cyanobacteria
TCT
Arg
>WENV170800957
MDSV01238828
341034
Cyanobacteria
GGT
Thr
>WENV170800983
MDSV01239270
267489
Cyanobacteria
GGC
Ala
>WENV170801160
MDSV01242077
267489
Cyanobacteria
GGC
Ala
>WENV170801258
MDSV01243923
23971
Cyanobacteria
TGA
Ser
>WENV170801562
MDSV01249003
164907
Cyanobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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