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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170966104
MTEX01001551
243370
Betaproteobacteria
CGT
Thr
>WENV170966121
MTEX01002037
147017
Betaproteobacteria
GAT
Ile
>WENV170966137
MTEX01002574
149229
Betaproteobacteria
TCT
Arg
>WENV170966154
MTEX01003116
72012
Betaproteobacteria
CAG
Leu
>WENV170966193
MTEX01003767
146751
Betaproteobacteria
TGG
Pro
>WENV170966194
MTEX01003767
146760
Betaproteobacteria
TCT
Arg
>WENV170966205
MTEX01004112
172608
Betaproteobacteria
TTG
Gln
>WENV170966223
MTEX01004379
291819
Betaproteobacteria
TGT
Thr
>WENV170966338
MTEX01006788
72012
Betaproteobacteria
CAG
Leu
>WENV170966372
MTEX01008120
400411
Betaproteobacteria
GGT
Thr
>WENV170966483
MTEX01011574
4907
Betaproteobacteria
GCT
Ser
>WENV170966513
MTEX01012226
400411
Betaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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