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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170972817
MTKY01002614
246789
Actinobacteria
CCT
Arg
>WENV170973210
MTKY01019605
245572
Actinobacteria
CTT
Lys
>WENV170973232
MTKY01021060
45451
Actinobacteria
GGA
Ser
>WENV170973336
MTKY01028878
147623
Actinobacteria
GAT
Ile
>WENV170973337
MTKY01028878
243458
Actinobacteria
TGC
Ala
>WENV170973363
MTKY01032465
411740
Actinobacteria
CCC
Gly
>WENV170973400
MTKY01035912
266917
Actinobacteria
GTG
His
>WENV170973505
MTKY01046723
183544
Actinobacteria
CAT
Met
>WENV170973551
MTKY01047450
366289
Actinobacteria
CTG
Gln
>WENV170973899
MTKY01051708
114484
Actinobacteria
GTA
Tyr
>WENV170973940
MTKY01051935
45451
Actinobacteria
GGA
Ser
>WENV170974317
MTKY01057672
238342
Actinobacteria
TTC
Glu
>WENV170974453
MTKY01062326
176229
Actinobacteria
CAA
Leu
>WENV170974576
MTKY01066135
416034
Actinobacteria
TCC
Gly
>WENV170974577
MTKY01066135
152011
Actinobacteria
TGG
Pro
>WENV170974777
MTKY01074014
240960
Actinobacteria
TTC
Glu
>WENV170974825
MTKY01076339
238339
Actinobacteria
CGT
Thr
>WENV170974862
MTKY01078222
278331
Actinobacteria
ACG
Arg
>WENV170975050
MTKY01089034
270259
Actinobacteria
TTC
Glu
>WENV170975226
MTKY01097851
267252
Actinobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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