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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180104049
OAPB01064538
267922
Alphaproteobacteria
CCA
Trp
>WENV180103719
OAPB01001371
241021
Alphaproteobacteria
GGC
Ala
>WENV180103782
OAPB01006154
113700
Alphaproteobacteria
>WENV180103812
OAPB01008508
338282
Alphaproteobacteria
GTT
Asn
>WENV180103727
OAPB01002081
147083
Alphaproteobacteria
GGG
Pro
>WENV180103712
OAPB01000668
147879
Alphaproteobacteria
TGG
Pro
>WENV180103709
OAPB01000572
281594
Alphaproteobacteria
TGT
Thr
>WENV180104093
OAPB01078759
113716
Alphaproteobacteria
CAA
Leu
>WENV180104163
OAPB01101628
59118
Alphaproteobacteria
CAG
Leu
>WENV180103722
OAPB01001648
28682
Alphaproteobacteria
GGA
Ser
>WENV180103682
OAPB01000176
340106
Alphaproteobacteria
GCC
Gly
>WENV180103873
OAPB01018328
359842
Alphaproteobacteria
GAC
Val
>WENV180104191
OAPB01116098
412477
Alphaproteobacteria
GCA
Cys
>WENV180103943
OAPB01033428
82948
Alphaproteobacteria
CAA
Leu
>WENV180104084
OAPB01075587
370641
Alphaproteobacteria
GCC
Gly
>WENV180103783
OAPB01006183
154227
Alphaproteobacteria
CAT
Met
>WENV180103765
OAPB01004871
412424
Alphaproteobacteria
TCC
Gly
>WENV180103716
OAPB01001043
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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