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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180104271
OAPC01000413
267922
Alphaproteobacteria
CCA
Trp
>WENV180104398
OAPC01005693
241021
Alphaproteobacteria
GGC
Ala
>WENV180104307
OAPC01001055
113700
Alphaproteobacteria
>WENV180104324
OAPC01001501
176908
Alphaproteobacteria
GTC
Asp
>WENV180104328
OAPC01001623
338282
Alphaproteobacteria
GTT
Asn
>WENV180104252
OAPC01000133
147083
Alphaproteobacteria
GGG
Pro
>WENV180104885
OAPC01158837
368349
Alphaproteobacteria
GTT
Asn
>WENV180104388
OAPC01005191
147879
Alphaproteobacteria
TGG
Pro
>WENV180104912
OAPC01177775
281594
Alphaproteobacteria
TGT
Thr
>WENV180104423
OAPC01007272
113716
Alphaproteobacteria
CAA
Leu
>WENV180104294
OAPC01000841
28682
Alphaproteobacteria
GGA
Ser
>WENV180104903
OAPC01168271
28682
Alphaproteobacteria
GGA
Ser
>WENV180104648
OAPC01053422
23672
Alphaproteobacteria
GCT
Ser
>WENV180104251
OAPC01000132
340106
Alphaproteobacteria
GCC
Gly
>WENV180104707
OAPC01077853
341164
Alphaproteobacteria
GCC
Gly
>WENV180104606
OAPC01040224
359842
Alphaproteobacteria
GAC
Val
>WENV180104520
OAPC01019071
163860
Alphaproteobacteria
GGG
Pro
>WENV180104454
OAPC01009755
82948
Alphaproteobacteria
CAA
Leu
>WENV180104563
OAPC01029444
344517
Alphaproteobacteria
GTT
Asn
>WENV180104597
OAPC01039507
154227
Alphaproteobacteria
CAT
Met
>WENV180104275
OAPC01000580
412424
Alphaproteobacteria
TCC
Gly
>WENV180104358
OAPC01003337
412424
Alphaproteobacteria
TCC
Gly
>WENV180104365
OAPC01003508
236256
Alphaproteobacteria
TAC
Val
>WENV180104385
OAPC01004842
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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