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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180109033
OAPJ01000423
147083
Alphaproteobacteria
GGG
Pro
>WENV180109036
OAPJ01000597
319925
Alphaproteobacteria
TGT
Thr
>WENV180109037
OAPJ01000681
338760
Alphaproteobacteria
GAA
Phe
>WENV180109084
OAPJ01005075
147088
Alphaproteobacteria
CCT
Arg
>WENV180109101
OAPJ01006509
147334
Alphaproteobacteria
CAT
Met
>WENV180109113
OAPJ01008714
23672
Alphaproteobacteria
GCT
Ser
>WENV180109127
OAPJ01010732
147876
Alphaproteobacteria
TCT
Arg
>WENV180109137
OAPJ01013272
236256
Alphaproteobacteria
TAC
Val
>WENV180109193
OAPJ01024102
28682
Alphaproteobacteria
GGA
Ser
>WENV180109204
OAPJ01028288
339722
Alphaproteobacteria
TTG
Gln
>WENV180109221
OAPJ01032682
236256
Alphaproteobacteria
TAC
Val
>WENV180109339
OAPJ01085528
280207
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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