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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180118014
OARX01000010
145317
Gammaproteobacteria
ACG
Arg
>WENV180117975
OARX01000001
237463
Gammaproteobacteria
GTT
Asn
>WENV180117977
OARX01000001
235449
Gammaproteobacteria
>WENV180117979
OARX01000001
235449
Gammaproteobacteria
>WENV180118054
OARX01000058
235449
Gammaproteobacteria
>WENV180118286
OARX01020855
235449
Gammaproteobacteria
>WENV180118326
OARX01033399
235449
Gammaproteobacteria
>WENV180118039
OARX01000031
6971
Gammaproteobacteria
GCT
Ser
>WENV180118030
OARX01000016
144917
Gammaproteobacteria
>WENV180117981
OARX01000002
144950
Gammaproteobacteria
GGG
Pro
>WENV180117992
OARX01000002
95726
Gammaproteobacteria
>WENV180118001
OARX01000005
95726
Gammaproteobacteria
>WENV180117985
OARX01000002
95726
Gammaproteobacteria
>WENV180117990
OARX01000002
95726
Gammaproteobacteria
>WENV180118015
OARX01000010
113619
Gammaproteobacteria
>WENV180117996
OARX01000004
411729
Gammaproteobacteria
>WENV180117998
OARX01000004
411729
Gammaproteobacteria
>WENV180118046
OARX01000036
95614
Gammaproteobacteria
>WENV180118108
OARX01000534
95614
Gammaproteobacteria
>WENV180118426
OARX01086979
95614
Gammaproteobacteria
>WENV180118213
OARX01007440
235488
Gammaproteobacteria
TAC
Val
>WENV180118019
OARX01000014
235452
Gammaproteobacteria
GAA
Phe
>WENV180118023
OARX01000014
235452
Gammaproteobacteria
GAA
Phe
>WENV180117984
OARX01000002
80691
Gammaproteobacteria
CAG
Leu
>WENV180117988
OARX01000002
80691
Gammaproteobacteria
CAG
Leu
>WENV180117994
OARX01000002
80691
Gammaproteobacteria
CAG
Leu
>WENV180118212
OARX01007440
339614
Gammaproteobacteria
TTT
Lys
>WENV180118041
OARX01000031
7018
Gammaproteobacteria
GCT
Ser
>WENV180118110
OARX01000534
236119
Gammaproteobacteria
GGT
Thr
>WENV180118004
OARX01000006
95725
Gammaproteobacteria
CAA
Leu
>WENV180118007
OARX01000008
44883
Gammaproteobacteria
GGA
Ser
>WENV180118006
OARX01000007
145547
Gammaproteobacteria
GAC
Val
>WENV180117986
OARX01000002
343593
Gammaproteobacteria
>WENV180117989
OARX01000002
343593
Gammaproteobacteria
>WENV180117995
OARX01000002
343593
Gammaproteobacteria
>WENV180118000
OARX01000005
343593
Gammaproteobacteria
>WENV180118040
OARX01000031
145320
Gammaproteobacteria
ACG
Arg
>WENV180118022
OARX01000014
238714
Gammaproteobacteria
GTT
Asn
>WENV180118025
OARX01000014
238714
Gammaproteobacteria
GTT
Asn
>WENV180118027
OARX01000014
238714
Gammaproteobacteria
GTT
Asn
>WENV180118017
OARX01000013
235317
Gammaproteobacteria
GGT
Thr
>WENV180117980
OARX01000002
145548
Gammaproteobacteria
TCT
Arg
>WENV180117978
OARX01000001
58760
Gammaproteobacteria
>WENV180117997
OARX01000004
58760
Gammaproteobacteria
>WENV180117976
OARX01000001
413554
Gammaproteobacteria
GCA
Cys
>WENV180118059
OARX01000086
148834
Gammaproteobacteria
CAT
Met
>WENV180118285
OARX01020855
148834
Gammaproteobacteria
CAT
Met
>WENV180118021
OARX01000014
235453
Gammaproteobacteria
GAA
Phe
>WENV180117991
OARX01000002
338678
Gammaproteobacteria
>WENV180117982
OARX01000002
16250
Gammaproteobacteria
TGA
Ser
>WENV180118008
OARX01000009
16250
Gammaproteobacteria
TGA
Ser
>WENV180118005
OARX01000007
147159
Gammaproteobacteria
>WENV180118042
OARX01000031
236117
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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