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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180124925
OASY01000248
144589
Actinobacteria
ACG
Arg
>WENV180124952
OASY01000309
37070
Actinobacteria
CGA
Ser
>WENV180124892
OASY01000219
235174
Actinobacteria
TGC
Ala
>WENV180124968
OASY01000337
235101
Actinobacteria
TTT
Lys
>WENV180125555
OASY01030411
145345
Actinobacteria
TAC
Val
>WENV180124889
OASY01000213
198659
Actinobacteria
TAC
Val
>WENV180125080
OASY01000695
254857
Actinobacteria
CCG
Arg
>WENV180124953
OASY01000309
44942
Actinobacteria
TGA
Ser
>WENV180124919
OASY01000236
98279
Actinobacteria
GTA
Tyr
>WENV180125180
OASY01001058
338148
Actinobacteria
CTG
Gln
>WENV180125214
OASY01001293
235148
Actinobacteria
GTT
Asn
>WENV180125230
OASY01001458
235148
Actinobacteria
GTT
Asn
>WENV180125231
OASY01001458
235148
Actinobacteria
GTT
Asn
>WENV180124914
OASY01000228
176456
Actinobacteria
TCT
Arg
>WENV180125154
OASY01000974
145347
Actinobacteria
CAA
Leu
>WENV180125605
OASY01062457
235348
Actinobacteria
CCT
Arg
>WENV180124921
OASY01000239
16467
Actinobacteria
GCT
Ser
>WENV180125149
OASY01000962
411554
Actinobacteria
CCC
Gly
>WENV180125091
OASY01000732
113601
Actinobacteria
TAG
Leu
>WENV180124842
OASY01000134
145343
Actinobacteria
GGG
Pro
>WENV180125280
OASY01002380
235149
Actinobacteria
CCT
Arg
>WENV180125150
OASY01000968
91808
Actinobacteria
CAG
Leu
>WENV180125220
OASY01001352
145269
Actinobacteria
CAT
Met
>WENV180125090
OASY01000732
235121
Actinobacteria
CGT
Thr
>WENV180125053
OASY01000583
144635
Actinobacteria
TGG
Pro
>WENV180125268
OASY01002042
119485
Actinobacteria
TAA
Leu
>WENV180124893
OASY01000219
235173
Actinobacteria
GGC
Ala
>WENV180125239
OASY01001583
235173
Actinobacteria
GGC
Ala
>WENV180124880
OASY01000199
278447
Actinobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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