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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180124825
OASY01000109
235182
Bacteroidetes
>WENV180124792
OASY01000073
144688
Bacteroidetes
CAT
Met
>WENV180124874
OASY01000184
235207
Bacteroidetes
CAT
Met
>WENV180124852
OASY01000147
343138
Bacteroidetes
CCT
Arg
>WENV180125117
OASY01000809
338314
Bacteroidetes
CCT
Arg
>WENV180124973
OASY01000368
272983
Bacteroidetes
CGT
Thr
>WENV180124770
OASY01000052
338155
Bacteroidetes
CTC
Glu
>WENV180124700
OASY01000018
411543
Bacteroidetes
CTG
Gln
>WENV180124769
OASY01000052
23696
Bacteroidetes
GCT
Ser
>WENV180124669
OASY01000001
19528
Bacteroidetes
GGA
Ser
>WENV180124727
OASY01000028
181746
Bacteroidetes
GGC
Ala
>WENV180124695
OASY01000014
139743
Bacteroidetes
GGG
Pro
>WENV180125615
OASY01073707
338165
Bacteroidetes
GGT
Thr
>WENV180124688
OASY01000009
80607
Bacteroidetes
GTA
Tyr
>WENV180124877
OASY01000195
95618
Bacteroidetes
TAG
Leu
>WENV180124693
OASY01000011
144933
Bacteroidetes
TCT
Arg
>WENV180124667
OASY01000001
55270
Bacteroidetes
TGA
Ser
>WENV180124668
OASY01000001
55270
Bacteroidetes
TGA
Ser
>WENV180124954
OASY01000311
55270
Bacteroidetes
TGA
Ser
>WENV180124834
OASY01000128
411629
Bacteroidetes
TTG
Gln
>WENV180125021
OASY01000500
411629
Bacteroidetes
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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