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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180142494
OATW01000389
144589
Actinobacteria
ACG
Arg
>WENV180142495
OATW01000389
144589
Actinobacteria
ACG
Arg
>WENV180142581
OATW01001513
144589
Actinobacteria
ACG
Arg
>WENV180142582
OATW01001531
144589
Actinobacteria
ACG
Arg
>WENV180142555
OATW01000927
123202
Actinobacteria
ACG
Arg
>WENV180142422
OATW01000129
144595
Actinobacteria
CAA
Leu
>WENV180142560
OATW01000934
144595
Actinobacteria
CAA
Leu
>WENV180142531
OATW01000709
267574
Actinobacteria
CAC
Val
>WENV180142579
OATW01001506
267574
Actinobacteria
CAC
Val
>WENV180142455
OATW01000242
91808
Actinobacteria
CAG
Leu
>WENV180142597
OATW01002302
144825
Actinobacteria
CAT
Met
>WENV180142590
OATW01001978
163948
Actinobacteria
CAT
Met
>WENV180142576
OATW01001358
411601
Actinobacteria
CCC
Gly
>WENV180142492
OATW01000377
411554
Actinobacteria
CCC
Gly
>WENV180142514
OATW01000563
411554
Actinobacteria
CCC
Gly
>WENV180142589
OATW01001941
235092
Actinobacteria
CCG
Arg
>WENV180142536
OATW01000751
237794
Actinobacteria
CCG
Arg
>WENV180142588
OATW01001913
237792
Actinobacteria
CCT
Arg
>WENV180142578
OATW01001402
235348
Actinobacteria
CCT
Arg
>WENV180142439
OATW01000181
235149
Actinobacteria
CCT
Arg
>WENV180142521
OATW01000637
37070
Actinobacteria
CGA
Ser
>WENV180142598
OATW01002512
44862
Actinobacteria
CGA
Ser
>WENV180142615
OATW01011004
45147
Actinobacteria
CGA
Ser
>WENV180142575
OATW01001246
235146
Actinobacteria
CGT
Thr
>WENV180142452
OATW01000231
235121
Actinobacteria
CGT
Thr
>WENV180142491
OATW01000373
338148
Actinobacteria
CTG
Gln
>WENV180142523
OATW01000644
201717
Actinobacteria
CTT
Lys
>WENV180142525
OATW01000665
201717
Actinobacteria
CTT
Lys
>WENV180142599
OATW01002655
16400
Actinobacteria
GAG
Leu
>WENV180142457
OATW01000267
16219
Actinobacteria
GCT
Ser
>WENV180142558
OATW01000927
37521
Actinobacteria
GCT
Ser
>WENV180142428
OATW01000147
47164
Actinobacteria
GGA
Ser
>WENV180142604
OATW01003690
235347
Actinobacteria
GGC
Ala
>WENV180142421
OATW01000127
235173
Actinobacteria
GGC
Ala
>WENV180142497
OATW01000394
235173
Actinobacteria
GGC
Ala
>WENV180142501
OATW01000409
235173
Actinobacteria
GGC
Ala
>WENV180142532
OATW01000709
235173
Actinobacteria
GGC
Ala
>WENV180142383
OATW01000049
145343
Actinobacteria
GGG
Pro
>WENV180142503
OATW01000480
98279
Actinobacteria
GTA
Tyr
>WENV180142516
OATW01000570
144625
Actinobacteria
GTC
Asp
>WENV180142493
OATW01000385
278447
Actinobacteria
GTG
His
>WENV180142402
OATW01000080
235148
Actinobacteria
GTT
Asn
>WENV180142528
OATW01000704
235148
Actinobacteria
GTT
Asn
>WENV180142520
OATW01000620
243162
Actinobacteria
GTT
Asn
>WENV180142424
OATW01000136
119475
Actinobacteria
TAA
Leu
>WENV180142539
OATW01000790
113702
Actinobacteria
TAA
Leu
>WENV180142568
OATW01000968
145345
Actinobacteria
TAC
Val
>WENV180142467
OATW01000281
198659
Actinobacteria
TAC
Val
>WENV180142610
OATW01005379
113703
Actinobacteria
TAG
Leu
>WENV180142453
OATW01000231
113601
Actinobacteria
TAG
Leu
>WENV180142466
OATW01000280
144593
Actinobacteria
TAT
Ile
>WENV180142522
OATW01000643
176456
Actinobacteria
TCT
Arg
>WENV180142621
OATW01013534
144823
Actinobacteria
TCT
Arg
>WENV180142591
OATW01002008
51286
Actinobacteria
TGA
Ser
>WENV180142569
OATW01000983
44851
Actinobacteria
TGA
Ser
>WENV180142420
OATW01000127
235174
Actinobacteria
TGC
Ala
>WENV180142571
OATW01000991
235174
Actinobacteria
TGC
Ala
>WENV180142423
OATW01000129
144635
Actinobacteria
TGG
Pro
>WENV180142513
OATW01000544
338239
Actinobacteria
TTC
Glu
>WENV180142587
OATW01001832
338239
Actinobacteria
TTC
Glu
>WENV180142502
OATW01000409
413665
Actinobacteria
TTG
Gln
>WENV180142559
OATW01000927
411599
Actinobacteria
TTG
Gln
>WENV180142410
OATW01000098
235101
Actinobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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