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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180165919
OAVL01000448
235146
Actinomycetota
CGT
Thr
>WENV180165818
OAVL01000073
119475
Actinomycetota
TAA
Leu
>WENV180165855
OAVL01000125
235347
Actinomycetota
GGC
Ala
>WENV180165856
OAVL01000125
235347
Actinomycetota
GGC
Ala
>WENV180165908
OAVL01000314
144589
Actinomycetota
ACG
Arg
>WENV180165909
OAVL01000314
144589
Actinomycetota
ACG
Arg
>WENV180165764
OAVL01000022
16400
Actinomycetota
GAG
Leu
>WENV180165872
OAVL01000174
37070
Actinomycetota
CGA
Ser
>WENV180165750
OAVL01000011
201717
Actinomycetota
CTT
Lys
>WENV180165780
OAVL01000030
201717
Actinomycetota
CTT
Lys
>WENV180165898
OAVL01000271
201717
Actinomycetota
CTT
Lys
>WENV180165857
OAVL01000125
144600
Actinomycetota
TGG
Pro
>WENV180165813
OAVL01000067
235092
Actinomycetota
CCG
Arg
>WENV180165966
OAVL01001233
235194
Actinomycetota
GTG
His
>WENV180165761
OAVL01000018
158720
Actinomycetota
ACG
Arg
>WENV180165916
OAVL01000376
158720
Actinomycetota
ACG
Arg
>WENV180165992
OAVL01010522
158720
Actinomycetota
ACG
Arg
>WENV180165871
OAVL01000172
411601
Actinomycetota
CCC
Gly
>WENV180165794
OAVL01000042
144826
Actinomycetota
GGG
Pro
>WENV180165875
OAVL01000183
23370
Actinomycetota
GCT
Ser
>WENV180165762
OAVL01000018
147146
Actinomycetota
ACG
Arg
>WENV180165771
OAVL01000026
174149
Actinomycetota
GAT
Ile
>WENV180165775
OAVL01000028
338239
Actinomycetota
TTC
Glu
>WENV180165828
OAVL01000090
338239
Actinomycetota
TTC
Glu
>WENV180165781
OAVL01000033
16219
Actinomycetota
GCT
Ser
>WENV180165755
OAVL01000015
235174
Actinomycetota
TGC
Ala
>WENV180165772
OAVL01000026
235174
Actinomycetota
TGC
Ala
>WENV180165873
OAVL01000182
235101
Actinomycetota
TTT
Lys
>WENV180165819
OAVL01000074
121510
Actinomycetota
TAA
Leu
>WENV180165776
OAVL01000028
144625
Actinomycetota
GTC
Asp
>WENV180165891
OAVL01000240
144625
Actinomycetota
GTC
Asp
>WENV180165849
OAVL01000103
44855
Actinomycetota
TGA
Ser
>WENV180165699
OAVL01000003
145345
Actinomycetota
TAC
Val
>WENV180165823
OAVL01000079
235199
Actinomycetota
CAC
Val
>WENV180165918
OAVL01000417
44862
Actinomycetota
CGA
Ser
>WENV180165914
OAVL01000331
198659
Actinomycetota
TAC
Val
>WENV180165767
OAVL01000023
413665
Actinomycetota
TTG
Gln
>WENV180165854
OAVL01000125
413665
Actinomycetota
TTG
Gln
>WENV180165821
OAVL01000079
254857
Actinomycetota
CCG
Arg
>WENV180165785
OAVL01000036
16223
Actinomycetota
GAG
Leu
>WENV180165805
OAVL01000053
144593
Actinomycetota
TAT
Ile
>WENV180165930
OAVL01000614
113703
Actinomycetota
TAG
Leu
>WENV180165874
OAVL01000183
144700
Actinomycetota
CAT
Met
>WENV180165792
OAVL01000039
45147
Actinomycetota
CGA
Ser
>WENV180165743
OAVL01000011
295695
Actinomycetota
CTC
Glu
>WENV180165799
OAVL01000049
295695
Actinomycetota
CTC
Glu
>WENV180165782
OAVL01000033
98279
Actinomycetota
GTA
Tyr
>WENV180165744
OAVL01000011
338148
Actinomycetota
CTG
Gln
>WENV180165800
OAVL01000049
338148
Actinomycetota
CTG
Gln
>WENV180165757
OAVL01000016
235148
Actinomycetota
GTT
Asn
>WENV180165798
OAVL01000046
235148
Actinomycetota
GTT
Asn
>WENV180165751
OAVL01000011
53078
Actinomycetota
GGA
Ser
>WENV180165778
OAVL01000030
53078
Actinomycetota
GGA
Ser
>WENV180165700
OAVL01000003
237792
Actinomycetota
CCT
Arg
>WENV180165701
OAVL01000003
113702
Actinomycetota
TAA
Leu
>WENV180165921
OAVL01000463
176456
Actinomycetota
TCT
Arg
>WENV180165869
OAVL01000166
144825
Actinomycetota
CAT
Met
>WENV180165795
OAVL01000044
235348
Actinomycetota
CCT
Arg
>WENV180165745
OAVL01000011
237794
Actinomycetota
CCG
Arg
>WENV180165797
OAVL01000045
411554
Actinomycetota
CCC
Gly
>WENV180165801
OAVL01000050
411554
Actinomycetota
CCC
Gly
>WENV180165976
OAVL01002942
113601
Actinomycetota
TAG
Leu
>WENV180165702
OAVL01000003
144595
Actinomycetota
CAA
Leu
>WENV180165820
OAVL01000074
144595
Actinomycetota
CAA
Leu
>WENV180165866
OAVL01000154
144595
Actinomycetota
CAA
Leu
>WENV180165920
OAVL01000462
235149
Actinomycetota
CCT
Arg
>WENV180165769
OAVL01000025
51286
Actinomycetota
TGA
Ser
>WENV180165975
OAVL01002942
235121
Actinomycetota
CGT
Thr
>WENV180165867
OAVL01000154
144635
Actinomycetota
TGG
Pro
>WENV180165796
OAVL01000045
80622
Actinomycetota
CAG
Leu
>WENV180165965
OAVL01001205
80622
Actinomycetota
CAG
Leu
>WENV180165973
OAVL01002213
80622
Actinomycetota
CAG
Leu
>WENV180165896
OAVL01000254
44851
Actinomycetota
TGA
Ser
>WENV180165885
OAVL01000219
16222
Actinomycetota
GAG
Leu
>WENV180165788
OAVL01000038
163948
Actinomycetota
CAT
Met
>WENV180165749
OAVL01000011
235173
Actinomycetota
GGC
Ala
>WENV180165756
OAVL01000016
235173
Actinomycetota
GGC
Ala
>WENV180165766
OAVL01000023
235173
Actinomycetota
GGC
Ala
>WENV180165826
OAVL01000088
235173
Actinomycetota
GGC
Ala
>WENV180165765
OAVL01000023
243162
Actinomycetota
GTT
Asn
>WENV180165850
OAVL01000112
243162
Actinomycetota
GTT
Asn
>WENV180165852
OAVL01000120
243162
Actinomycetota
GTT
Asn
>WENV180165853
OAVL01000120
243162
Actinomycetota
GTT
Asn
>WENV180165893
OAVL01000250
144660
Actinomycetota
TAC
Val
>WENV180165884
OAVL01000218
278447
Actinomycetota
GTG
His
>WENV180165748
OAVL01000011
267574
Actinomycetota
CAC
Val
>WENV180165902
OAVL01000295
267574
Actinomycetota
CAC
Val
>WENV180165789
OAVL01000039
95593
Actinomycetota
>WENV180165806
OAVL01000058
144823
Actinomycetota
TCT
Arg
>WENV180165824
OAVL01000086
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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