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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180185785
OAWU01000161
243647
Bacillota
TTT
Lys
>WENV180186001
OAWU01000894
243647
Bacillota
TTT
Lys
>WENV180185704
OAWU01000055
16842
Bacillota
CGA
Ser
>WENV180186108
OAWU01001881
16842
Bacillota
CGA
Ser
>WENV180186261
OAWU01009822
305466
Bacillota
GTG
His
>WENV180185869
OAWU01000311
391536
Bacillota
TTC
Glu
>WENV180185626
OAWU01000001
302152
Bacillota
CTT
Lys
>WENV180185627
OAWU01000001
302152
Bacillota
CTT
Lys
>WENV180186249
OAWU01008704
322812
Bacillota
TGT
Thr
>WENV180185777
OAWU01000149
16834
Bacillota
GCT
Ser
>WENV180186071
OAWU01001459
16834
Bacillota
GCT
Ser
>WENV180186000
OAWU01000894
243646
Bacillota
GTT
Asn
>WENV180185688
OAWU01000045
114002
Bacillota
CAA
Leu
>WENV180185981
OAWU01000707
114002
Bacillota
CAA
Leu
>WENV180185982
OAWU01000730
37437
Bacillota
TAA
Leu
>WENV180185825
OAWU01000219
96360
Bacillota
GTA
Tyr
>WENV180185870
OAWU01000311
243612
Bacillota
TAC
Val
>WENV180185690
OAWU01000047
316443
Bacillota
GTC
Asp
>WENV180186141
OAWU01002382
147135
Bacillota
ACG
Arg
>WENV180185708
OAWU01000055
194150
Bacillota
TGG
Pro
>WENV180185913
OAWU01000444
194150
Bacillota
TGG
Pro
>WENV180186265
OAWU01009950
235701
Bacillota
TTT
Lys
>WENV180185907
OAWU01000430
339391
Bacillota
TTC
Glu
>WENV180186197
OAWU01004201
339391
Bacillota
TTC
Glu
>WENV180185705
OAWU01000055
235197
Bacillota
GTC
Asp
>WENV180185802
OAWU01000171
235197
Bacillota
GTC
Asp
>WENV180185999
OAWU01000894
368876
Bacillota
GCC
Gly
>WENV180186304
OAWU01018969
368876
Bacillota
GCC
Gly
>WENV180186286
OAWU01014517
243401
Bacillota
CGT
Thr
>WENV180185692
OAWU01000047
113225
Bacillota
TAG
Leu
>WENV180185783
OAWU01000161
243613
Bacillota
GTG
His
>WENV180186226
OAWU01006291
152491
Bacillota
CAT
Met
>WENV180186222
OAWU01006291
273029
Bacillota
TGT
Thr
>WENV180186225
OAWU01006291
281472
Bacillota
GGT
Thr
>WENV180185710
OAWU01000055
178024
Bacillota
TCT
Arg
>WENV180185915
OAWU01000444
178024
Bacillota
TCT
Arg
>WENV180186205
OAWU01005017
413657
Bacillota
CCC
Gly
>WENV180185868
OAWU01000311
287034
Bacillota
GTT
Asn
>WENV180186196
OAWU01004201
7065
Bacillota
GCT
Ser
>WENV180185784
OAWU01000161
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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