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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180228576
OBCD01000269
243275
Actinomycetota
CCT
Arg
>WENV180228559
OBCD01000151
235615
Actinomycetota
TGC
Ala
>WENV180228612
OBCD01001118
235615
Actinomycetota
TGC
Ala
>WENV180228648
OBCD01002268
235615
Actinomycetota
TGC
Ala
>WENV180228481
OBCD01000011
37831
Actinomycetota
GGA
Ser
>WENV180228478
OBCD01000011
235605
Actinomycetota
CGT
Thr
>WENV180228527
OBCD01000064
145084
Actinomycetota
GGG
Pro
>WENV180228598
OBCD01000572
235606
Actinomycetota
GGT
Thr
>WENV180228519
OBCD01000050
3286
Actinomycetota
>WENV180228567
OBCD01000191
235663
Actinomycetota
TTT
Lys
>WENV180228497
OBCD01000029
241627
Actinomycetota
>WENV180228498
OBCD01000029
241627
Actinomycetota
>WENV180228599
OBCD01000572
338474
Actinomycetota
CAT
Met
>WENV180228549
OBCD01000132
147913
Actinomycetota
TCT
Arg
>WENV180228568
OBCD01000191
235574
Actinomycetota
TTC
Glu
>WENV180228700
OBCD01013785
239230
Actinomycetota
CCT
Arg
>WENV180228558
OBCD01000151
145065
Actinomycetota
GAT
Ile
>WENV180228479
OBCD01000011
95655
Actinomycetota
GTA
Tyr
>WENV180228699
OBCD01013675
95655
Actinomycetota
GTA
Tyr
>WENV180228684
OBCD01008619
415620
Actinomycetota
TCC
Gly
>WENV180228509
OBCD01000039
16526
Actinomycetota
CGA
Ser
>WENV180228520
OBCD01000052
266917
Actinomycetota
GTG
His
>WENV180228495
OBCD01000029
176229
Actinomycetota
CAA
Leu
>WENV180228585
OBCD01000382
37093
Actinomycetota
GAG
Leu
>WENV180228693
OBCD01011228
152196
Actinomycetota
CAT
Met
>WENV180228529
OBCD01000072
148463
Actinomycetota
TAA
Leu
>WENV180228618
OBCD01001841
45282
Actinomycetota
CAG
Leu
>WENV180228704
OBCD01018415
411682
Actinomycetota
GCA
Cys
>WENV180228610
OBCD01000940
238648
Actinomycetota
GAA
Phe
>WENV180228510
OBCD01000041
155153
Actinomycetota
CAT
Met
>WENV180228483
OBCD01000015
235655
Actinomycetota
GTT
Asn
>WENV180228505
OBCD01000037
155156
Actinomycetota
CCG
Arg
>WENV180228706
OBCD01019185
80899
Actinomycetota
CAG
Leu
>WENV180228717
OBCD01024544
340284
Actinomycetota
GAC
Val
>WENV180228528
OBCD01000072
338387
Actinomycetota
>WENV180228471
OBCD01000006
412586
Actinomycetota
CCC
Gly
>WENV180228698
OBCD01013493
147156
Actinomycetota
GAA
Phe
>WENV180228521
OBCD01000052
235609
Actinomycetota
CTT
Lys
>WENV180228663
OBCD01004265
148476
Actinomycetota
GGG
Pro
>WENV180228511
OBCD01000041
238649
Actinomycetota
TAC
Val
>WENV180228652
OBCD01002610
238649
Actinomycetota
TAC
Val
>WENV180228650
OBCD01002440
270497
Actinomycetota
GAA
Phe
>WENV180228484
OBCD01000015
359306
Actinomycetota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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