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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180350669
OBLQ010005970
183605
Gammaproteobacteria
CCG
Arg
>WENV180352817
OBLQ010393918
163492
Gammaproteobacteria
TGG
Pro
>WENV180352663
OBLQ010326289
108171
Gammaproteobacteria
GTA
Tyr
>WENV180351977
OBLQ010139111
154268
Gammaproteobacteria
ACG
Arg
>WENV180352964
OBLQ010465785
190084
Gammaproteobacteria
CCT
Arg
>WENV180351744
OBLQ010097229
202944
Gammaproteobacteria
TGG
Pro
>WENV180351466
OBLQ010059197
175987
Gammaproteobacteria
CGG
Pro
>WENV180351632
OBLQ010080562
316532
Gammaproteobacteria
GTG
His
>WENV180353605
OBLQ010906706
237412
Gammaproteobacteria
TAC
Val
>WENV180351061
OBLQ010023733
59460
Gammaproteobacteria
CAA
Leu
>WENV180350987
OBLQ010020034
17108
Gammaproteobacteria
GCT
Ser
>WENV180351205
OBLQ010033092
17108
Gammaproteobacteria
GCT
Ser
>WENV180353970
OBLQ011240848
293332
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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