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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180389941
OBPK01005402
241021
Alphaproteobacteria
GGC
Ala
>WENV180390046
OBPK01017680
113700
Alphaproteobacteria
>WENV180389883
OBPK01001796
95611
Alphaproteobacteria
TAG
Leu
>WENV180389876
OBPK01001397
239119
Alphaproteobacteria
CGT
Thr
>WENV180389839
OBPK01000558
338282
Alphaproteobacteria
GTT
Asn
>WENV180389912
OBPK01003101
147083
Alphaproteobacteria
GGG
Pro
>WENV180390240
OBPK01061866
113716
Alphaproteobacteria
CAA
Leu
>WENV180389890
OBPK01002011
340106
Alphaproteobacteria
GCC
Gly
>WENV180390110
OBPK01026930
340106
Alphaproteobacteria
GCC
Gly
>WENV180390009
OBPK01013068
341164
Alphaproteobacteria
GCC
Gly
>WENV180390101
OBPK01025694
344517
Alphaproteobacteria
GTT
Asn
>WENV180389958
OBPK01007732
147283
Alphaproteobacteria
GTG
His
>WENV180389992
OBPK01011128
338287
Alphaproteobacteria
GGT
Thr
>WENV180389877
OBPK01001540
412424
Alphaproteobacteria
TCC
Gly
>WENV180390008
OBPK01012996
412424
Alphaproteobacteria
TCC
Gly
>WENV180390247
OBPK01065154
150356
Alphaproteobacteria
GTC
Asp
>WENV180389935
OBPK01005093
342846
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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