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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180404364
OBSA01000232
95987
Bacteroidota
CAA
Leu
>WENV180404513
OBSA01004198
95987
Bacteroidota
CAA
Leu
>WENV180404539
OBSA01005673
95987
Bacteroidota
CAA
Leu
>WENV180405076
OBSA01161713
339412
Bacteroidota
GGT
Thr
>WENV180404426
OBSA01001393
267954
Bacteroidota
GCC
Gly
>WENV180404489
OBSA01003396
267954
Bacteroidota
GCC
Gly
>WENV180404294
OBSA01000020
237796
Bacteroidota
CGT
Thr
>WENV180404500
OBSA01003775
97336
Bacteroidota
CAG
Leu
>WENV180404349
OBSA01000125
413663
Bacteroidota
CTG
Gln
>WENV180404432
OBSA01001470
237797
Bacteroidota
CCA
Trp
>WENV180404422
OBSA01001275
144695
Bacteroidota
CAT
Met
>WENV180404458
OBSA01002064
412479
Bacteroidota
TTG
Gln
>WENV180404281
OBSA01000015
147147
Bacteroidota
GTG
His
>WENV180404378
OBSA01000423
147147
Bacteroidota
GTG
His
>WENV180404379
OBSA01000423
147147
Bacteroidota
GTG
His
>WENV180404536
OBSA01005389
147147
Bacteroidota
GTG
His
>WENV180404798
OBSA01052556
155123
Bacteroidota
GTT
Asn
>WENV180404578
OBSA01010619
145504
Bacteroidota
TGT
Thr
>WENV180404706
OBSA01033331
238810
Bacteroidota
CGG
Pro
>WENV180404271
OBSA01000011
193809
Bacteroidota
CAT
Met
>WENV180404357
OBSA01000198
37076
Bacteroidota
TAA
Leu
>WENV180404387
OBSA01000495
37076
Bacteroidota
TAA
Leu
>WENV180404450
OBSA01002013
37076
Bacteroidota
TAA
Leu
>WENV180404386
OBSA01000491
251266
Bacteroidota
CTT
Lys
>WENV180404279
OBSA01000015
344769
Bacteroidota
CTC
Glu
>WENV180404280
OBSA01000015
344769
Bacteroidota
CTC
Glu
>WENV180404352
OBSA01000154
344769
Bacteroidota
CTC
Glu
>WENV180404353
OBSA01000154
344769
Bacteroidota
CTC
Glu
>WENV180404373
OBSA01000324
344769
Bacteroidota
CTC
Glu
>WENV180404699
OBSA01031462
159518
Bacteroidota
GAT
Ile
>WENV180404297
OBSA01000027
415558
Bacteroidota
TTG
Gln
>WENV180404703
OBSA01032178
175704
Bacteroidota
TGC
Ala
>WENV180404772
OBSA01047595
175704
Bacteroidota
TGC
Ala
>WENV180405065
OBSA01159269
175704
Bacteroidota
TGC
Ala
>WENV180404640
OBSA01019924
132360
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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