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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180419175
OBVM01000233
270475
Bacillota
GAA
Phe
>WENV180419443
OBVM01010134
243647
Bacillota
TTT
Lys
>WENV180419158
OBVM01000217
16842
Bacillota
CGA
Ser
>WENV180419461
OBVM01018078
97943
Bacillota
GTA
Tyr
>WENV180419397
OBVM01003662
37083
Bacillota
TGA
Ser
>WENV180419155
OBVM01000213
16834
Bacillota
GCT
Ser
>WENV180419395
OBVM01003662
235290
Bacillota
TTG
Gln
>WENV180419317
OBVM01001046
243612
Bacillota
TAC
Val
>WENV180419399
OBVM01003662
144766
Bacillota
CAT
Met
>WENV180419229
OBVM01000404
147135
Bacillota
ACG
Arg
>WENV180419298
OBVM01000919
342895
Bacillota
CAT
Met
>WENV180419393
OBVM01003662
411584
Bacillota
TCC
Gly
>WENV180419239
OBVM01000525
194150
Bacillota
TGG
Pro
>WENV180419458
OBVM01016754
338206
Bacillota
TGT
Thr
>WENV180419133
OBVM01000169
235197
Bacillota
GTC
Asp
>WENV180419400
OBVM01003662
144764
Bacillota
CAT
Met
>WENV180419300
OBVM01000955
368876
Bacillota
GCC
Gly
>WENV180419217
OBVM01000349
243613
Bacillota
GTG
His
>WENV180419396
OBVM01003662
235291
Bacillota
TTT
Lys
>WENV180419459
OBVM01016754
95580
Bacillota
GTA
Tyr
>WENV180419325
OBVM01001208
152491
Bacillota
CAT
Met
>WENV180419394
OBVM01003662
144762
Bacillota
TCT
Arg
>WENV180419392
OBVM01003654
273029
Bacillota
TGT
Thr
>WENV180419324
OBVM01001208
281472
Bacillota
GGT
Thr
>WENV180419241
OBVM01000525
178024
Bacillota
TCT
Arg
>WENV180419274
OBVM01000699
287034
Bacillota
GTT
Asn
>WENV180419301
OBVM01000955
287034
Bacillota
GTT
Asn
>WENV180419218
OBVM01000349
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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